RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 STX1BP61266 288 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 UFM1P61960 85 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 DCAF7P61962 342 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 PPIAP62937 165 aaKnown RBP15.66■□□□□ 0.1
VPS52-215ENST00000464425 HSF1Q00613 529 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 MLC1Q15049 377 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 DESI1Q6ICB0 168 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 CLEC18BQ6UXF7 455 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 SPATA21Q7Z572 469 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 FBXW8Q8N3Y1 598 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 CLEC18CQ8NCF0 446 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 OR52N2Q8NGI0 321 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 C10orf82Q8WW14 230 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 DIO2Q92813 273 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 ELP4Q96EB1 424 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 HSPBAP1Q96EW2 488 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 VSTM2LQ96N03 204 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 ELAC2Q9BQ52 826 aaKnown RBP15.66■□□□□ 0.1
VPS52-215ENST00000464425 TTTY12Q9BZ98 90 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 BHLHE41Q9C0J9 482 aaPredicted RBP15.66■□□□□ 0.1
VPS52-215ENST00000464425 DEFB127Q9H1M4 99 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 RABEP2Q9H5N1 569 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 DDX18Q9NVP1 670 aaKnown RBP15.66■□□□□ 0.1
VPS52-215ENST00000464425 TUBA8Q9NY65 449 aaPredicted RBP15.66■□□□□ 0.1
VPS52-215ENST00000464425 TAS2R9Q9NYW1 312 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 C19orf53Q9UNZ5 99 aaPredicted RBP15.66■□□□□ 0.1
VPS52-215ENST00000464425 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.66■□□□□ 0.1
VPS52-215ENST00000464425 HIVEP3Q5T1R4 2406 aa15.66■□□□□ 0.1
VPS52-215ENST00000464425 A0A087WV62 115 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 FRG2CA6NGY1 282 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 PLOD2O00469 737 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 TP53I11O14683 189 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 ACOX3O15254 700 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 CDC40O60508 579 aaKnown RBP eCLIP15.65■□□□□ 0.1
VPS52-215ENST00000464425 ERN1O75460 977 aaKnown RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 PDE9AO76083 593 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 SLITRK5O94991 958 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 ABCB1P08183 1280 aaPredicted RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 IFI6P09912 130 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 CT45A8P0DMV1 189 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 CT45A9P0DMV2 189 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 TMED10P49755 219 aaKnown RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 KCNJ2P63252 427 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 PLCXD2Q0VAA5 305 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 ZNF155Q12901 538 aaPredicted RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 CT45A2Q5DJT8 189 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 BICRALQ6AI39 1079 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 GK5Q6ZS86 529 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 OMA1Q96E52 524 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 ZBED6CLQ96FA7 236 aaPredicted RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 MARK4Q96L34 752 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 TEX37Q96LM6 180 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 JSRP1Q96MG2 331 aaPredicted RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 ZBTB18Q99592 522 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 DUSP26Q9BV47 211 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 ZNF385DQ9H6B1 395 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 PROK2Q9HC23 129 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 RYDENQ9NUL5 291 aaKnown RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 CNIH4Q9P003 139 aa15.65■□□□□ 0.1
VPS52-215ENST00000464425 ERRFI1Q9UJM3 462 aaPredicted RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 CNOT11Q9UKZ1 510 aaKnown RBP15.65■□□□□ 0.1
VPS52-215ENST00000464425 LRRTM2O43300 516 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 SNX3O60493 162 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 COQ9O75208 318 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 PPM1BO75688 479 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 IL6P05231 212 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 NCF2P19878 526 aaPredicted RBP15.64■□□□□ 0.09
VPS52-215ENST00000464425 IL12AP29459 219 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 KIR3DL1P43629 444 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 CDK9P50750 372 aaKnown RBP15.64■□□□□ 0.09
VPS52-215ENST00000464425 NME5P56597 212 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 RBPJQ06330 500 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 FOXO1Q12778 655 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 SQLEQ14534 574 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 PGS1Q32NB8 556 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 CMPK2Q5EBM0 449 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 C1QL3Q5VWW1 255 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 NPSR1Q6W5P4 371 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 WDR53Q7Z5U6 358 aaPredicted RBP15.64■□□□□ 0.09
VPS52-215ENST00000464425 PIGWQ7Z7B1 504 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 SLC22A16Q86VW1 577 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 SLC44A2Q8IWA5 706 aaPredicted RBP15.64■□□□□ 0.09
VPS52-215ENST00000464425 OR2L13Q8N349 312 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 ZFP28Q8NHY6 868 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 SPPL2AQ8TCT8 520 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 TMBIM1Q969X1 311 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 BTBD9Q96Q07 612 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 COL12A1Q99715 3063 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 DOHHQ9BU89 302 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 IL1RL2Q9HB29 575 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 SH3BGRL2Q9UJC5 107 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 SLC5A6Q9Y289 635 aa15.64■□□□□ 0.09
VPS52-215ENST00000464425 NUP214P35658 2090 aaPredicted RBP15.63■□□□□ 0.09
VPS52-215ENST00000464425 NINQ8N4C6 2090 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 TRGV8A0A0C4DH27 118 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 A0A1W2PRB8 838 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 ACOT7O00154 380 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 RNASET2O00584 256 aaKnown RBP15.63■□□□□ 0.09
VPS52-215ENST00000464425 TO15178 435 aa15.63■□□□□ 0.09
VPS52-215ENST00000464425 SLC19A2O60779 497 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms