RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 HPGDSO60760 199 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 GABARAPO95166 117 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 C1orf105O95561 183 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TSPAN12O95859 305 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 CD2P06729 351 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TGFBR2P37173 567 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SLC6A11P48066 632 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SUOXP51687 545 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 AP3S2P59780 193 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 CD300CQ08708 224 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SCRN3Q0VDG4 424 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SLC14A1Q13336 389 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 GAS6Q14393 721 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SLC14A2Q15849 920 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TMEM31Q5JXX7 168 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 ZNF782Q6ZMW2 699 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 VRK2Q86Y07 508 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 NATD1Q8N6N6 113 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 OR52E2Q8NGJ4 325 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 OR6N2Q8NGY6 317 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 EFHD2Q96C19 240 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 MBOAT4Q96T53 435 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 ZNF717Q9BY31 904 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 DDX31Q9H8H2 851 aaKnown RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 NTN4Q9HB63 628 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 NUDT15Q9NV35 164 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TEX10Q9NXF1 929 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 L7N2F9 121 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 APEX1P27695 318 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 MAP3K8P41279 467 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 RAB28P51157 221 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 CLDN2P57739 230 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 PPP3R1P63098 170 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 SHC2P98077 582 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 DEFA5Q01523 94 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 EIF2B5Q13144 721 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 METTL2BQ6P1Q9 378 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 ARMC10Q8N2F6 343 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 LINC00471Q8N535 108 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 ADAMTS16Q8TE57 1224 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 THAP3Q8WTV1 239 aaPredicted RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 ZNF385DQ9H6B1 395 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 CXorf36Q9H7Y0 433 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 MED20Q9H944 212 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 TM7SF3Q9NS93 570 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 FARSAQ9Y285 508 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 UGT2A1Q9Y4X1 527 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 TRBV2A0A0J9YWF9 115 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 TCRBV5S2A0A599 114 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 ZSCAN5BA6NJL1 495 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 NARSO43776 548 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 LDB3O75112 727 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 S100A9P06702 114 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 CD3GP09693 182 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 HOXD8P13378 290 aaPredicted RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 CR2P20023 1033 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 DNASE1P24855 282 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 IL12BP29460 328 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 PFN3P60673 137 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 CXCR4P61073 352 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 SLC35A2P78381 396 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 ACVR1Q04771 509 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 ZNF776Q68DI1 518 aaPredicted RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 NRROSQ86YC3 692 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 PJA1Q8NG27 643 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 CEP76Q8TAP6 659 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 TBL1XR1Q9BZK7 514 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 P2RY12Q9H244 342 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 RANGRFQ9HD47 186 aaPredicted RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 STARD5Q9NSY2 213 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 MSRAQ9UJ68 235 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 BAIAP2Q9UQB8 552 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 AK6Q9Y3D8 172 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 SH3D21A4FU49 640 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 WASHC1A8K0Z3 465 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 HIDE1A8MVS5 230 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 DDCP20711 480 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 TGM4P49221 684 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 GNG2P59768 71 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 TP53I3Q53FA7 332 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 PAQR6Q6TCH4 344 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 WASH2PQ6VEQ5 465 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 ABHD13Q7L211 337 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 RNASE11Q8TAA1 199 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 SLC2A11Q9BYW1 496 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 Q9N2J8 555 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 THSD1Q9NS62 852 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 KCMF1Q9P0J7 381 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 HCN3Q9P1Z3 774 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 MYEF2Q9P2K5 600 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 ANKMY1Q9P2S6 941 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 PSORS1C1Q9UIG5 152 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 ACSL5Q9ULC5 683 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 YARS2Q9Y2Z4 477 aaKnown RBP8.58□□□□□ -1.04
HPS4-208ENST00000464362 MAU2Q9Y6X3 613 aa8.58□□□□□ -1.04
HPS4-208ENST00000464362 C1orf226A1L170 272 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 K7ESM1 405 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 LYRM1O43325 122 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms