RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PTGDSP41222 190 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 CASP3P42574 277 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 GAB1Q13480 694 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 KRTCAP3Q53RY4 240 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 TMEM198Q66K66 360 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 TMEM81Q6P7N7 255 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 FAM47EQ6ZV65 393 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 SPATA19Q7Z5L4 167 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 WDR53Q7Z5U6 358 aaPredicted RBP16.23■□□□□ 0.19
VPS52-214ENST00000463486 SLC44A2Q8IWA5 706 aaPredicted RBP16.23■□□□□ 0.19
VPS52-214ENST00000463486 NATD1Q8N6N6 113 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 OR52N2Q8NGI0 321 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 ZFP28Q8NHY6 868 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 TESCQ96BS2 214 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 FAM120BQ96EK7 910 aaKnown RBP16.23■□□□□ 0.19
VPS52-214ENST00000463486 MAGEB18Q96M61 343 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 NODALQ96S42 347 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 DUSP26Q9BV47 211 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 CXorf36Q9H7Y0 433 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 ZDHHC11Q9H8X9 412 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 ATAD3AQ9NVI7 634 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 SEC14L3Q9UDX4 400 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 NPIPA1Q9UND3 350 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 NINQ8N4C6 2090 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 ZNF407Q9C0G0 2248 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 OR6C70A6NIJ9 312 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 TP53I11O14683 189 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 SEMA7AO75326 666 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 C6orf47O95873 294 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 RFPL3SP0C7P2 107 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 GPC1P35052 558 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 TMED10P49755 219 aaKnown RBP16.22■□□□□ 0.19
VPS52-214ENST00000463486 UFM1P61960 85 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 HBA1P69905 142 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 PLCXD2Q0VAA5 305 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 OR4F3Q6IEY1 312 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 BNC2Q6ZN30 1099 aaPredicted RBP16.22■□□□□ 0.19
VPS52-214ENST00000463486 TMEM251Q8N6I4 163 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 NUP43Q8NFH3 380 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 DIO2Q92813 273 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 C16orf58Q96GQ5 468 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 PRPF18Q99633 342 aaKnown RBP16.22■□□□□ 0.19
VPS52-214ENST00000463486 DPY30Q9C005 99 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 IL1RL2Q9HB29 575 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 ZNF835Q9Y2P0 537 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 HRH3Q9Y5N1 445 aa16.22■□□□□ 0.19
VPS52-214ENST00000463486 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.22■□□□□ 0.19
VPS52-214ENST00000463486 SETXQ7Z333 2677 aaKnown RBP16.21■□□□□ 0.19
VPS52-214ENST00000463486 ZNHIT1O43257 154 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 EMC8O43402 210 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 NKX2-2O95096 273 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 TGDSO95455 350 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 STSP08842 583 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 ACP2P11117 423 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 DDX5P17844 614 aaKnown RBP16.21■□□□□ 0.19
VPS52-214ENST00000463486 ZFP36L2P47974 494 aaKnown RBP16.21■□□□□ 0.19
VPS52-214ENST00000463486 IDH3AP50213 366 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 PPIAP62937 165 aaKnown RBP16.21■□□□□ 0.19
VPS52-214ENST00000463486 PSPHP78330 225 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 HSF1Q00613 529 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 ZNF155Q12901 538 aaPredicted RBP16.21■□□□□ 0.19
VPS52-214ENST00000463486 PGS1Q32NB8 556 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 LSM12Q3MHD2 195 aaKnown RBP16.21■□□□□ 0.19
VPS52-214ENST00000463486 CYP27C1Q4G0S4 372 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 MFSD12Q6NUT3 480 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 GFRALQ6UXV0 394 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 GK5Q6ZS86 529 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 CLECL1Q8IZS7 167 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 CEP70Q8NHQ1 597 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 PRR7Q8TB68 274 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 COL21A1Q96P44 957 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 ADOQ96SZ5 270 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 ZFP64Q9NPA5 681 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 GPATCH2Q9NW75 528 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 MAPRE3Q9UPY8 281 aa16.21■□□□□ 0.19
VPS52-214ENST00000463486 GXYLT2A0PJZ3 443 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 FAM166BA8MTA8 275 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 RNASET2O00584 256 aaKnown RBP16.2■□□□□ 0.18
VPS52-214ENST00000463486 REM1O75628 298 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 IGKV1D-16P01601 117 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 CELA3AP09093 270 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 MAN2A2P49641 1150 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 PNLIPRP2P54317 469 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 NME5P56597 212 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 SPANXN4Q5MJ08 99 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 TBCELQ5QJ74 424 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 SLC16A11Q8NCK7 471 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 FAM110BQ8TC76 370 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 DYDC1Q8WWB3 177 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 RILPQ96NA2 401 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 EBF4Q9BQW3 602 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 ACBD3Q9H3P7 528 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 C3orf14Q9HBI5 128 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 SDR39U1Q9NRG7 319 aaPredicted RBP16.2■□□□□ 0.18
VPS52-214ENST00000463486 OSGIN2Q9Y236 505 aa16.2■□□□□ 0.18
VPS52-214ENST00000463486 PRSS51A0A1B0GVH4 220 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 WIPF3A6NGB9 483 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 TTC36A6NLP5 189 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 B4DXG7 233 aa16.19■□□□□ 0.18
VPS52-214ENST00000463486 C9JVG2 144 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms