RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 C3orf38Q5JPI3 329 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TOR1AIP1Q5JTV8 583 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 COLEC12Q5KU26 742 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 PRAMEF8Q5VWM4 474 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 PRAMEF7Q5VXH5 474 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 C6orf120Q7Z4R8 191 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 HORMAD2Q8N7B1 307 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 SMYD1Q8NB12 490 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 OR2A1Q8NGT9 310 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 C9orf43Q8TAL5 461 aaPredicted RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 DYNC2LI1Q8TCX1 351 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MIPOL1Q8TD10 442 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 SFXN5Q8TD22 340 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 SLC38A5Q8WUX1 472 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 FGF11Q92914 225 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 SLC38A4Q969I6 547 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 HSPBAP1Q96EW2 488 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 C12orf66Q96MD2 445 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF578Q96N58 590 aaPredicted RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 PRAP1Q96NZ9 151 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 KCNC2Q96PR1 638 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF607Q96SK3 696 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 COPS4Q9BT78 406 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ACAT2Q9BWD1 397 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ITPAQ9BY32 194 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 RAB33BQ9H082 229 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 HMG20AQ9NP66 347 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 CNOT2Q9NZN8 540 aaKnown RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 COLEC10Q9Y6Z7 277 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 LRIT2A6NDA9 550 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TMEM247A6NEH6 219 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ZAR1LA6NP61 321 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 CLDN25C9JDP6 229 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 M0R3G1 203 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 HMGN4O00479 90 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 OR1F1O43749 312 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TMPRSS11DO60235 418 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 BRINP1O60477 761 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 GUCY1B2O75343 617 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 UBXN7O94888 489 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 FADS2O95864 444 aaKnown RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TNFRSF1BP20333 461 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 PSMB9P28065 219 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 RBMS1P29558 406 aaKnown RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 CSF2RBP32927 897 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 KCNJ5P48544 419 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ANXA11P50995 505 aaKnown RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MAPK10P53779 464 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MLLT10P55197 1068 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TUBA1BP68363 451 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 IRF3Q14653 427 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MAPK11Q15759 364 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 DUSP7Q16829 419 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TBC1D25Q3MII6 688 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 AHSA2Q719I0 299 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TUBA1AQ71U36 451 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 PLXDC1Q8IUK5 500 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MMP21Q8N119 569 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 LINC00471Q8N535 108 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TBC1D19Q8N5T2 526 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 SLC15A4Q8N697 577 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 CHPT1Q8WUD6 406 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 PROX1Q92786 737 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MOAP1Q96BY2 351 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 CRELD1Q96HD1 420 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 TMEM19Q96HH6 336 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 SH3YL1Q96HL8 342 aaPredicted RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 COL21A1Q96P44 957 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ALPK1Q96QP1 1244 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 FERD3LQ96RJ6 166 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 NIPSNAP1Q9BPW8 284 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 FAIM2Q9BWQ8 316 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 BCL2L10Q9HD36 194 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 AKIP1Q9NQ31 210 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ASCL3Q9NQ33 180 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 RASSF1Q9NS23 344 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 RLIMQ9NVW2 624 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF226Q9NYT6 803 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 EPHA6Q9UF33 1036 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 MGAT4BQ9UQ53 548 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 HEBP2Q9Y5Z4 205 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 GPC6Q9Y625 555 aaPredicted RBP9.29□□□□□ -0.92
PTPRD-207ENST00000463477 A3GALT2U3KPV4 340 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 KIF26BQ2KJY2 2108 aa9.29□□□□□ -0.92
PTPRD-207ENST00000463477 ZZEF1O43149 2961 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 IGKV1-8A0A0C4DH67 115 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 EFCAB10A6NFE3 127 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 CDRT15L2A8MXV6 281 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 RTCAO00442 366 aaKnown RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 FAAHO00519 579 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 PCDH17O14917 1159 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 TOX3O15405 576 aaPredicted RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 LCMT2O60294 686 aaKnown RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 SERPINB7O75635 380 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 SLITRK5O94991 958 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 ZBTB11O95625 1053 aaPredicted RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 BCHEP06276 602 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 PIPP12273 146 aaPredicted RBP9.28□□□□□ -0.92
PTPRD-207ENST00000463477 PSMB5P28074 263 aa9.28□□□□□ -0.92
PTPRD-207ENST00000463477 ALDH9A1P49189 494 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms