RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 SLC2A10O95528 541 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 CEBPBP17676 345 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 POLR2EP19388 210 aaKnown RBP11.71□□□□□ -0.53
HDAC4-208ENST00000463007 CPN2P22792 545 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 GZMKP49863 264 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 WNT4P56705 351 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 MLLT11Q13015 90 aaPredicted RBP11.71□□□□□ -0.53
HDAC4-208ENST00000463007 FGFBP1Q14512 234 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 PXDC1Q5TGL8 231 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 MZT2BQ6NZ67 158 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 SYT9Q86SS6 491 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 PEX5LQ8IYB4 626 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 LRRC56Q8IYG6 542 aaPredicted RBP11.71□□□□□ -0.53
HDAC4-208ENST00000463007 NRSN1Q8IZ57 195 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 RDH10Q8IZV5 341 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 AMER3Q8N944 861 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 BBS1Q8NFJ9 593 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 UFD1Q92890 307 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 ZG16BQ96DA0 208 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 FAM46AQ96IP4 442 aaKnown RBP11.71□□□□□ -0.53
HDAC4-208ENST00000463007 FCRL4Q96PJ5 515 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 NUDT15Q9NV35 164 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 EXTL2Q9UBQ6 330 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 FBXW2Q9UKT8 454 aa11.71□□□□□ -0.53
HDAC4-208ENST00000463007 H7BY64 318 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 QSOX1O00391 747 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 ADAP00813 363 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 HSD3B1P14060 373 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 EPCAMP16422 314 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 PTX3P26022 381 aaPredicted RBP11.71□□□□□ -0.54
HDAC4-208ENST00000463007 HSD3B2P26439 372 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 ERP29P30040 261 aaKnown RBP11.71□□□□□ -0.54
HDAC4-208ENST00000463007 GPR4P46093 362 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 ILKQ13418 452 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 LASP1Q14847 261 aaKnown RBP11.71□□□□□ -0.54
HDAC4-208ENST00000463007 FCN2Q15485 313 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 ANKRD54Q6NXT1 300 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 C19orf48Q6RUI8 117 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 PRAP1Q96NZ9 151 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 MED20Q9H944 212 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 TAC3Q9UHF0 121 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 ENOPH1Q9UHY7 261 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 PRELID1Q9Y255 219 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.54
HDAC4-208ENST00000463007 EEF1E1O43324 174 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 KLHL18O94889 574 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 HNRNPA1P09651 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 ELFN1P0C7U0 828 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 IRS1P35568 1242 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 CCT3P49368 545 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 RPL6Q02878 288 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 DHCR24Q15392 516 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 ARHGAP15Q53QZ3 475 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 TCEAL5Q5H9L2 206 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 ZNF730Q6ZMV8 503 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 GDPD1Q8N9F7 314 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 DTD2Q96FN9 168 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 MSANTD3Q96H12 275 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 RIPOR3Q96MK2 946 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 C1QTNF6Q9BXI9 259 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 ZCCHC3Q9NUD5 404 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 TEX10Q9NXF1 929 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 WDR87Q6ZQQ6 2873 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 C5orf67F2Z3F1 127 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 LATO43561 262 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 AKAP8O43823 692 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 B4GALT2O60909 372 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 C1GALT1C1LP0DN25 315 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 RPS5P46782 204 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 MTNR1AP48039 350 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 STXBP1P61764 594 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 EEF1A2Q05639 463 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 KLHL12Q53G59 568 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 TOR1AIP1Q5JTV8 583 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 OR51G2Q8NGK0 314 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 ZFAND1Q8TCF1 268 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 SENP5Q96HI0 755 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 DPCDQ9BVM2 203 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 MKRN2Q9H000 416 aaKnown RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 ABCG5Q9H222 651 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 CUEDC1Q9NWM3 386 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-208ENST00000463007 MGAT4AQ9UM21 535 aa11.7□□□□□ -0.54
HDAC4-208ENST00000463007 IQCMA0A1B0GVH7 501 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 A0A1W2PS29 197 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 IL1AP01583 271 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 DRD5P21918 477 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 FCRLBQ6BAA4 426 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 HSDL2Q6YN16 418 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 ESPNLQ6ZVH7 1005 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 SAMD12Q8N8I0 201 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 OR5AR1Q8NGP9 310 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 SECISBP2Q96T21 854 aaKnown RBP11.69□□□□□ -0.54
HDAC4-208ENST00000463007 OR51I1Q9H343 314 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 RBFOX1Q9NWB1 397 aaKnown RBP11.69□□□□□ -0.54
HDAC4-208ENST00000463007 MGAT4BQ9UQ53 548 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 ASCC3Q8N3C0 2202 aaKnown RBP11.69□□□□□ -0.54
HDAC4-208ENST00000463007 A0A0B4J203 849 aa11.69□□□□□ -0.54
HDAC4-208ENST00000463007 MRPL3P09001 348 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms