RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 KBTBD12Q3ZCT8 623 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 FBXO48Q5FWF7 155 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 CDKL4Q5MAI5 379 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 SPANXN3Q5MJ09 141 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 AAGABQ6PD74 315 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 FAM214BQ7L5A3 538 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 NUP54Q7Z3B4 507 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 DTX2Q86UW9 622 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 PLCZ1Q86YW0 608 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 IGDCC3Q8IVU1 814 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 GALNT12Q8IXK2 581 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 RNF175Q8N4F7 328 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 NKAPQ8N5F7 415 aaKnown RBP6.91□□□□□ -1.3
SMC3-202ENST00000462899 PDPRQ8NCN5 879 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 OR7G3Q8NG95 312 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 ESAMQ96AP7 390 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 OMA1Q96E52 524 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 C11orf24Q96F05 449 aaPredicted RBP6.91□□□□□ -1.3
SMC3-202ENST00000462899 TRMT61AQ96FX7 289 aaKnown RBP6.91□□□□□ -1.3
SMC3-202ENST00000462899 DESI2Q9BSY9 194 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 OR51B5Q9H339 312 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 ESRP2Q9H6T0 727 aaKnown RBP6.91□□□□□ -1.3
SMC3-202ENST00000462899 LRTM1Q9HBL6 345 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 PLSCR4Q9NRQ2 329 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 LPAR3Q9UBY5 353 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 ZNF639Q9UID6 485 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 TRIM33Q9UPN9 1127 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 LIPT1Q9Y234 373 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 TSC22D4Q9Y3Q8 395 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 ZNF175Q9Y473 711 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 PSAT1Q9Y617 370 aa6.91□□□□□ -1.3
SMC3-202ENST00000462899 NCF1BA6NI72 391 aaPredicted RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 GLOD5A6NK44 160 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 C17orf51A8MQB3 221 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 NCF1CA8MVU1 366 aaPredicted RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 CLGNO14967 610 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 TO15178 435 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 SH3BGRLO75368 114 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 TNFRSF21O75509 655 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 EEDO75530 441 aaKnown RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 NR2F6P10588 404 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 NCF1P14598 390 aaPredicted RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 IL11P20809 199 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 IGFBP5P24593 272 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 SERPINB1P30740 379 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 BSGP35613 385 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 BUD31P41223 144 aaPredicted RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 HSPA7P48741 367 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 TAS2R39P59534 338 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 LOXL1Q08397 574 aaPredicted RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 CHIT1Q13231 466 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 PDK4Q16654 411 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 ZNF672Q499Z4 452 aaPredicted RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 PAGE2BQ5JRK9 111 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 NCMAPQ5T1S8 102 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 RNASEH2BQ5TBB1 312 aaKnown RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 STEAP4Q687X5 459 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 TRMT10BQ6PF06 316 aaKnown RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 P4HA3Q7Z4N8 544 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 ZC3HC1Q86WB0 502 aaKnown RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 MEX3DQ86XN8 651 aaKnown RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 TCAIMQ8N3R3 496 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 METTL25Q8N6Q8 603 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 FADS6Q8N9I5 356 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 OR7G1Q8NGA0 311 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 FNDC9Q8TBE3 224 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 RDH11Q8TC12 318 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 MAIP1Q8WWC4 291 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 NEUROG1Q92886 237 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 FBXW5Q969U6 566 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 REPS1Q96D71 796 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 CMTM7Q96FZ5 175 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 SLC35A4Q96G79 324 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 SFXN2Q96NB2 322 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 TNFRSF13CQ96RJ3 184 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 KRT12Q99456 494 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 TRAF4Q9BUZ4 470 aaPredicted RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 ITPAQ9BY32 194 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 PLA2G12AQ9BZM1 189 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 KLHL4Q9C0H6 718 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 DERL2Q9GZP9 239 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 RASSF4Q9H2L5 321 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 DDX31Q9H8H2 851 aaKnown RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 L2HGDHQ9H9P8 463 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 NOP53Q9NZM5 478 aaKnown RBP6.9□□□□□ -1.3
SMC3-202ENST00000462899 KLRF1Q9NZS2 232 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 PROCRQ9UNN8 238 aa6.9□□□□□ -1.3
SMC3-202ENST00000462899 VWFP04275 2813 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 OR6C70A6NIJ9 312 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 EREGO14944 169 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 PGRMC2O15173 223 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 ACOX3O15254 700 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 SPRY1O43609 319 aaPredicted RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 SS18L1O75177 396 aaPredicted RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 STK16O75716 305 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 AQP8O94778 261 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 CBX7O95931 251 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 RPLP1P05386 114 aaKnown RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 PGRP06401 933 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 IGHV4-31P0DP07 118 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms