RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 EXO1Q9UQ84 846 aaKnown RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 AKAP9Q99996 3911 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 TEP1Q99973 2627 aaKnown RBP17.28■□□□□ 0.36
VARS-220ENST00000461874 EXPH5Q8NEV8 1989 aa17.28■□□□□ 0.36
VARS-220ENST00000461874 KDM4EB2RXH2 506 aaPredicted RBP17.27■□□□□ 0.36
VARS-220ENST00000461874 TSPAN2O60636 221 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 RSL1D1O76021 490 aaKnown RBP17.27■□□□□ 0.36
VARS-220ENST00000461874 UROSP10746 265 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 CEACAM8P31997 349 aaPredicted RBP17.27■□□□□ 0.36
VARS-220ENST00000461874 TIMP3P35625 211 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 DLX5P56178 289 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 PSPHP78330 225 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 SLC18A2Q05940 514 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 SF3B4Q15427 424 aaKnown RBP eCLIP17.27■□□□□ 0.363e-8■■■■■ 27.7
VARS-220ENST00000461874 DCST1Q5T197 706 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 LIPMQ5VYY2 423 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 LACC1Q8IV20 430 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 NAXEQ8NCW5 288 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 TNIP2Q8NFZ5 429 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 CDC26Q8NHZ8 85 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 ABTB1Q969K4 478 aaPredicted RBP17.27■□□□□ 0.36
VARS-220ENST00000461874 WDYHV1Q96HA8 205 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 ADOQ96SZ5 270 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 SLC24A3Q9HC58 644 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 MYNNQ9NPC7 610 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 SERHLQ9NQF3 203 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 TAS2R9Q9NYW1 312 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 SENP1Q9P0U3 644 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 MAPRE3Q9UPY8 281 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 CAMK2AQ9UQM7 478 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 CCL27Q9Y4X3 112 aa17.27■□□□□ 0.36
VARS-220ENST00000461874 POLR3HQ9Y535 204 aaPredicted RBP17.27■□□□□ 0.36
VARS-220ENST00000461874 CBR3O75828 277 aa17.26■□□□□ 0.35
VARS-220ENST00000461874 NCBP2P52298 156 aaKnown RBP eCLIP17.26■□□□□ 0.35
VARS-220ENST00000461874 WNT3P56703 355 aa17.26■□□□□ 0.35
VARS-220ENST00000461874 EFR3AQ14156 821 aa17.26■□□□□ 0.35
VARS-220ENST00000461874 NSUN5P2Q63ZY6 315 aa17.26■□□□□ 0.35
VARS-220ENST00000461874 NOXRED1Q6NXP6 359 aa17.26■□□□□ 0.35
VARS-220ENST00000461874 LARP4Q71RC2 724 aaKnown RBP eCLIP17.26■□□□□ 0.35
VARS-220ENST00000461874 C10orf107Q8IVU9 208 aa17.26■□□□□ 0.35
VARS-220ENST00000461874 SLC44A2Q8IWA5 706 aaPredicted RBP17.26■□□□□ 0.35
VARS-220ENST00000461874 METTL2AQ96IZ6 378 aaKnown RBP17.26■□□□□ 0.35
VARS-220ENST00000461874 ZNF559Q9BR84 538 aa17.26■□□□□ 0.35
VARS-220ENST00000461874 MIEF1Q9NQG6 463 aa17.26■□□□□ 0.35
VARS-220ENST00000461874 MED12Q93074 2177 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 A0A087WV62 115 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 CD8B2A6NJW9 211 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 SLITRK5O94991 958 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 ACTL6AO96019 429 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 JUNP05412 331 aaKnown RBP17.25■□□□□ 0.35
VARS-220ENST00000461874 PRPH2P23942 346 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 KRT20P35900 424 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 KIAA0040Q15053 153 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 CLEC6AQ6EIG7 209 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 IKBIPQ70UQ0 350 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 PLCZ1Q86YW0 608 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 OR4N2Q8NGD1 307 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 RNF138Q8WVD3 245 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 OR2B2Q9GZK3 357 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 MID2Q9UJV3 735 aa17.25■□□□□ 0.35
VARS-220ENST00000461874 C19orf53Q9UNZ5 99 aaPredicted RBP17.25■□□□□ 0.35
VARS-220ENST00000461874 ANKHD1Q8IWZ3 2542 aaKnown RBP17.24■□□□□ 0.35
VARS-220ENST00000461874 NPIPB8E9PQR5 432 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 SLC28A1O00337 649 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 SYT5O00445 386 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 PLOD2O00469 737 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 DVL2O14641 736 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 COQ9O75208 318 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 SEC22BO75396 215 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 IL2RAP01589 272 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 IL12BP29460 328 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 NTSP30990 170 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 GCKP35557 465 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 MC3RP41968 323 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 PNLIPRP2P54317 469 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 PSG6Q00889 435 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 MYBPHQ13203 477 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 CES4AQ5XG92 561 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 POMZP3Q6PJE2 187 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 ARSKQ6UWY0 536 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 TMEM107Q6UX40 140 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 CDH24Q86UP0 819 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 RELL2Q8NC24 303 aaPredicted RBP17.24■□□□□ 0.35
VARS-220ENST00000461874 OR14L1PQ8NHC6 308 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 AMDHD1Q96NU7 426 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 TRIB1Q96RU8 372 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 GATA5Q9BWX5 397 aaPredicted RBP17.24■□□□□ 0.35
VARS-220ENST00000461874 GLIPR2Q9H4G4 154 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 ANKZF1Q9H8Y5 726 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 CALHM2Q9HA72 323 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 ZNF629Q9UEG4 869 aaPredicted RBP17.24■□□□□ 0.35
VARS-220ENST00000461874 L3MBTL1Q9Y468 752 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 OR10H1Q9Y4A9 318 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 WIF1Q9Y5W5 379 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 PTGDR2Q9Y5Y4 395 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 F8P00451 2351 aa17.24■□□□□ 0.35
VARS-220ENST00000461874 TLDC2A0PJX2 215 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 UPK1AO00322 258 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 AZIN1O14977 448 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms