RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 BEND6Q5SZJ8 279 aaPredicted RBP2.46□□□□□ -2.02
HDAC6-212ENST00000461608 DCST2Q5T1A1 773 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 C9orf66Q5T8R8 295 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 SLC39A4Q6P5W5 647 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 EMBQ6PCB8 327 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 APOOLQ6UXV4 268 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 RELL2Q8NC24 303 aaPredicted RBP2.46□□□□□ -2.02
HDAC6-212ENST00000461608 CSNK1G2-AS1Q8NCQ2 148 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 STKLD1Q8NE28 680 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 C17orf47Q8NEP4 570 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 NFAM1Q8NET5 270 aaPredicted RBP2.46□□□□□ -2.02
HDAC6-212ENST00000461608 SSC4DQ8WTU2 575 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 THRSPQ92748 146 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 MCHR2Q969V1 340 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 TRIM44Q96DX7 344 aaPredicted RBP2.46□□□□□ -2.02
HDAC6-212ENST00000461608 HPDLQ96IR7 371 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 ELMO2Q96JJ3 720 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 C9orf85Q96MD7 179 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 IWS1Q96ST2 819 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 TTYH2Q9BSA4 534 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 TRIM6Q9C030 488 aaPredicted RBP2.46□□□□□ -2.02
HDAC6-212ENST00000461608 ALG9Q9H6U8 611 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 COQ10BQ9H8M1 238 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 ESM1Q9NQ30 184 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 DUS2Q9NX74 493 aaKnown RBP2.46□□□□□ -2.02
HDAC6-212ENST00000461608 BLOC1S6Q9UL45 172 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 MRPS7Q9Y2R9 242 aaKnown RBP2.46□□□□□ -2.02
HDAC6-212ENST00000461608 KLHDC2Q9Y2U9 406 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 EXOSC1Q9Y3B2 195 aaKnown RBP2.46□□□□□ -2.02
HDAC6-212ENST00000461608 CARMIL1Q5VZK9 1371 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 CCDC7Q96M83 1385 aa2.46□□□□□ -2.02
HDAC6-212ENST00000461608 CUX2O14529 1486 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 A0A0U1RQV5 110 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 LRRC30A6NM36 301 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 C11orf98E9PRG8 122 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 TBX19O60806 448 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 SH3BGRLO75368 114 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 RHOBTB1O94844 696 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 MT-ND1P03886 318 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 PCCBP05166 539 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 CA3P07451 260 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 HOXB7P09629 217 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 HSPA5P11021 654 aaKnown RBP2.45□□□□□ -2.02
HDAC6-212ENST00000461608 PAICSP22234 425 aaKnown RBP2.45□□□□□ -2.02
HDAC6-212ENST00000461608 OTX2P32243 289 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 PRPHP41219 470 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 HTR5AP47898 357 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 ACADVLP49748 655 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF85Q03923 595 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 KLHL30Q0D2K2 578 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 OVGP1Q12889 678 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 EXOSC2Q13868 293 aaKnown RBP2.45□□□□□ -2.02
HDAC6-212ENST00000461608 CDKN3Q16667 212 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 TATDN3Q17R31 274 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 MICAQ29983 383 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 KRT71Q3SY84 523 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 C14orf28Q4W4Y0 310 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF506Q5JVG8 444 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 OLFML2AQ68BL7 652 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 PRR5LQ6MZQ0 368 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 PAQR6Q6TCH4 344 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 CBLN3Q6UW01 205 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 ISLR2Q6UXK2 745 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF841Q6ZN19 808 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 LPCAT2Q7L5N7 544 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 SLC47A2Q86VL8 602 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 EFCAB13Q8IY85 973 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 ABHD12Q8N2K0 398 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 Q8N377 158 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 ZNRF1Q8ND25 227 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 DENND6BQ8NEG7 585 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 OR52J3Q8NH60 311 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 FNDC8Q8TC99 324 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 CRYGNQ8WXF5 182 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 RASL10AQ92737 203 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 AKR1E2Q96JD6 320 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 C18orf12Q96KH6 178 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF599Q96NL3 588 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 HEXA-AS1Q9H8Q6 139 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 IL1RL2Q9HB29 575 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 FAM114A2Q9NRY5 505 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 C1orf123Q9NWV4 160 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 TAS2R16Q9NYV7 291 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 MLXQ9UH92 298 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 TMCC3Q9ULS5 477 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 B9D1Q9UPM9 204 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 AP4B1Q9Y6B7 739 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 NOTCH3Q9UM47 2321 aa2.45□□□□□ -2.02
HDAC6-212ENST00000461608 PPIAL4CA0A0B4J2A2 164 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 TEX48A0A1B0GUV7 120 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 A0A1W2PNV4 684 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ACOD1A6NK06 481 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF487B1APH4 448 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 TM9SF1O15321 606 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 LANCL1O43813 399 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 TYROBPO43914 113 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 JAK2O60674 1132 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 SDC3O75056 442 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 OR4F21O95013 312 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 CHRNA1P02708 482 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms