RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 PAX8Q06710 450 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 RAPSNQ13702 412 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 EIF2B1Q14232 305 aaKnown RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 CD226Q15762 336 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 CCL14Q16627 93 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 PCK2Q16822 640 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 DCAF4L1Q3SXM0 396 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ZNF311Q5JNZ3 666 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 C9orf66Q5T8R8 295 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 NIPAL3Q6P499 406 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 EMBQ6PCB8 327 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ISLR2Q6UXK2 745 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ZNF562Q6V9R5 426 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 WASH2PQ6VEQ5 465 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ZNF573Q86YE8 665 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 CCDC71Q8IV32 467 aaPredicted RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 CCDC36Q8IYA8 594 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 CENPLQ8N0S6 344 aaPredicted RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 Q8N377 158 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ARL6IP6Q8N6S5 226 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 CSNK1G2-AS1Q8NCQ2 148 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ZNRF1Q8ND25 227 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ZNF599Q96NL3 588 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 VPS35Q96QK1 796 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 IWS1Q96ST2 819 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ZNF416Q9BWM5 594 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 CARD6Q9BX69 1037 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 TSPY26PQ9H489 355 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 KAT8Q9H7Z6 458 aaKnown RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 HEXA-AS1Q9H8Q6 139 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 WDR76Q9H967 626 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 LPAR2Q9HBW0 351 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 FARSBQ9NSD9 589 aaKnown RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 GPR83Q9NYM4 423 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 RNF6Q9Y252 685 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 EIF3LQ9Y262 564 aaKnown RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 DDX49Q9Y6V7 483 aaKnown RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 RIMBP3CA6NJZ7 1639 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 RIMBP3BA6NNM3 1639 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 RIMBP3Q9UFD9 1639 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 CUL7Q14999 1698 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 IGHV3OR16-12A0A075B7B8 117 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 TRBV7-9A0A0J9YWB2 115 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 A0A1B0GUL7 405 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 TDRD15B5MCY1 1934 aaKnown RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 SMPD2O60906 423 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 DIRAS3O95661 229 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 ANXA4P09525 319 aaPredicted RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 ZNF883P0CG24 379 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 ZCCHC18P0CG32 403 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 UQCRBP14927 111 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 H2AFXP16104 143 aaPredicted RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 IGFBP5P24593 272 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 KIF5BP33176 963 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 ADRA1AP35348 466 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 SAA4P35542 130 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 TRIM23P36406 574 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 RPL34P49207 117 aaKnown RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 EMDP50402 254 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 PRELPP51888 382 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 MFAP2P55001 183 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 OSTNP61366 133 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 GRIN2AQ12879 1464 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 TPD52L1Q16890 204 aaPredicted RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 DNAJC21Q5F1R6 531 aaKnown RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 BEND6Q5SZJ8 279 aaPredicted RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 PAQR6Q6TCH4 344 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 APOOLQ6UXV4 268 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 TMEM184AQ6ZMB5 413 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 ZNF497Q6ZNH5 498 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 CENPUQ71F23 418 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 KIF27Q86VH2 1401 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 ERICH1Q86X53 443 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 CBWD2Q8IUF1 395 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 GCNT2Q8N0V5 402 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 FADS6Q8N9I5 356 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 C17orf47Q8NEP4 570 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 NFAM1Q8NET5 270 aaPredicted RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 OR5AU1Q8NGC0 362 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 MCHR2Q969V1 340 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 VSTM2LQ96N03 204 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 TTYH2Q9BSA4 534 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 FEM1AQ9BSK4 669 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 TBCDQ9BTW9 1192 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 MRPL13Q9BYD1 178 aaKnown RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 COQ10BQ9H8M1 238 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 IL1RL2Q9HB29 575 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 SALL1Q9NSC2 1324 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 DCAF13Q9NV06 445 aaKnown RBP3.06□□□□□ -1.92
CLK1-206ENST00000461326 TAS2R16Q9NYV7 291 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 RAI14Q9P0K7 980 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 GHRLQ9UBU3 117 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 MLXQ9UH92 298 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 BLOC1S6Q9UL45 172 aa3.06□□□□□ -1.92
CLK1-206ENST00000461326 CEP170Q5SW79 1584 aa3.05□□□□□ -1.92
CLK1-206ENST00000461326 ARHGEF11O15085 1522 aa3.05□□□□□ -1.92
CLK1-206ENST00000461326 CLASP1Q7Z460 1538 aa3.05□□□□□ -1.92
CLK1-206ENST00000461326 FHAD1B1AJZ9 1412 aa3.05□□□□□ -1.92
CLK1-206ENST00000461326 SNED1Q8TER0 1413 aa3.05□□□□□ -1.92
CLK1-206ENST00000461326 CCDC7Q96M83 1385 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms