RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 BMP7P18075 431 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 KIR2DL3P43628 341 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 PPICP45877 212 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 RAE1P78406 368 aaKnown RBP14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 ZNF628Q5EBL2 1059 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 VASNQ6EMK4 673 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 SEM1Q6ZVN7 128 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 FAM9CQ8IZT9 166 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 CCDC63Q8NA47 563 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 RELL2Q8NC24 303 aaPredicted RBP14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 NAXEQ8NCW5 288 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 WFDC11Q8NEX6 87 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 OR14L1PQ8NHC6 308 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 ZNF675Q8TD23 568 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 C16orf78Q8WTQ4 265 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 CTHRC1Q96CG8 243 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 L3HYPDHQ96EM0 354 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 ZNF681Q96N22 645 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 COL21A1Q96P44 957 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 BBS4Q96RK4 519 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 REPIN1Q9BWE0 567 aaKnown RBP14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 ANKRA2Q9H9E1 313 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 DCDC2Q9UHG0 476 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 ABCA4P78363 2273 aa14.36□□□□□ -0.11
CHCHD3-204ENST00000457942 KIAA1549Q9HCM3 1950 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 ESPNB1AK53 854 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 H0Y3Z8 333 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 ZNF500O60304 480 aaPredicted RBP14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 GLRA3O75311 464 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 ERN1O75460 977 aaKnown RBP14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 ANXA4P09525 319 aaPredicted RBP14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 CYP4B1P13584 511 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 DRD5P21918 477 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 PEX19P40855 299 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 EMDP50402 254 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 ZNF155Q12901 538 aaPredicted RBP14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 SNTA1Q13424 505 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 CFAP157Q5JU67 520 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 DCST1Q5T197 706 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 CCDC126Q96EE4 140 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 DTNBP1Q96EV8 351 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 MIEF1Q9NQG6 463 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 SLC35C2Q9NQQ7 365 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 DKKL1Q9UK85 242 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 OR10H1Q9Y4A9 318 aa14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 V9GYY5 206 aaPredicted RBP14.35□□□□□ -0.11
CHCHD3-204ENST00000457942 MED12Q93074 2177 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 OR6C70A6NIJ9 312 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 SMIM23A6NLE4 172 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 EEF1E1-BLOC1S5C9J1V9 151 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 EEF1E1O43324 174 aaKnown RBP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 ABCB7O75027 752 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 NME6O75414 186 aaPredicted RBP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 ACTL6AO96019 429 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 TCEA1P23193 301 aaKnown RBP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 ADSLP30566 484 aaPredicted RBP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 CEACAM8P31997 349 aaPredicted RBP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 MPIP34949 423 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 TIMP3P35625 211 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 NAGLUP54802 743 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 CORO7P57737 925 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 SRYQ05066 204 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 ZNF763Q0D2J5 394 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 EFR3AQ14156 821 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 NHSL2Q5HYW2 709 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 SH2D4BQ5SQS7 431 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 FBXW10Q5XX13 1052 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 NSUN5P2Q63ZY6 315 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 TMEM81Q6P7N7 255 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 LARP4Q71RC2 724 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 IFNEQ86WN2 208 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 CNPY4Q8N129 248 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 UBLCP1Q8WVY7 318 aaPredicted RBP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 RNASE6Q93091 150 aaKnown RBP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 ERP27Q96DN0 273 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 WDYHV1Q96HA8 205 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 DOCK7Q96N67 2140 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 ALPK1Q96QP1 1244 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 ADOQ96SZ5 270 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 GSTO2Q9H4Y5 243 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 FOLH1BQ9HBA9 442 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 CRIM1Q9NZV1 1036 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 FETUBQ9UGM5 382 aa14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 GPR55Q9Y2T6 319 aaPredicted RBP14.34□□□□□ -0.11
CHCHD3-204ENST00000457942 CD8B2A6NJW9 211 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 TO15178 435 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 COQ9O75208 318 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 CBR3O75828 277 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 JUNP05412 331 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 NTSP30990 170 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 SOX18P35713 384 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 PTGDSP41222 190 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 GSTM5P46439 218 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 SLCO1A2P46721 670 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 NCBP2P52298 156 aaKnown RBP eCLIP14.33□□□□□ -0.126e-9■□□□□ 10.1
CHCHD3-204ENST00000457942 AGFG1P52594 562 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 ZNF136P52737 540 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 C2orf80Q0P641 193 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 ENPP6Q6UWR7 440 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms