RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ZNF717Q9BY31 904 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 BARHL1Q9BZE3 327 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZDHHC5Q9C0B5 715 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 SAP130Q9H0E3 1048 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 SMG9Q9H0W8 520 aaKnown RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 IRF2BPLQ9H1B7 796 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 MED28Q9H204 178 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 MMP28Q9H239 520 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR52A5Q9H2C5 316 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 DPAGT1Q9H3H5 408 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 PIGUQ9H490 435 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 RERGLQ9H628 205 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 RANBP3Q9H6Z4 567 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 DDX31Q9H8H2 851 aaKnown RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 TBC1D17Q9HA65 648 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 RANGRFQ9HD47 186 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 MRPS30Q9NP92 439 aaKnown RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC35C2Q9NQQ7 365 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 PHPT1Q9NRX4 125 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 C14orf105Q9NVL8 296 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 SAGE1Q9NXZ1 904 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 AKAP7Q9P0M2 348 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 COPZ2Q9P299 210 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF624Q9P2J8 865 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 TNFRSF10DQ9UBN6 386 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 EXTL2Q9UBQ6 330 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 PLEKHB1Q9UF11 243 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 TESQ9UGI8 421 aaKnown RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 NUFIP1Q9UHK0 495 aaKnown RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 MBD1Q9UIS9 605 aaPredicted RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 FBXL21Q9UKT6 434 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 ACSL5Q9ULC5 683 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 PLAGL1Q9UM63 463 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 NDRG2Q9UN36 371 aaKnown RBP3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 A4GNTQ9UNA3 340 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 SH2B3Q9UQQ2 575 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 TMEM5Q9Y2B1 443 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 TMEM98Q9Y2Y6 226 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 NOX1Q9Y5S8 564 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 HEBP2Q9Y5Z4 205 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 ALG5Q9Y673 324 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 CDH10Q9Y6N8 788 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 SPACA6W5XKT8 324 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 DENND4CQ5VZ89 1909 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 ALPK3Q96L96 1907 aa3.14□□□□□ -1.91
HMGN1P18-201ENST00000457642 A0A0A6YYD5 115 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 DAPL1A0PJW8 107 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 FEZF1A0PJY2 475 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 URADA6NGE7 173 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 UNC119BA6NIH7 251 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC22A31A6NKX4 558 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CPSF4LA6NMK7 179 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RIIAD1A6NNX1 92 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ISM1B1AKI9 464 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PRR23D1E9PI22 279 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 H7BY64 318 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 WWP2O00308 870 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RTCAO00442 366 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 BTN3A3O00478 584 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 GABRPO00591 440 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MAN2B1O00754 1011 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PDCD5O14737 125 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ERI3O43414 337 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RNF13O43567 381 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SSX4O60224 188 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TMPRSS11DO60235 418 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 HPGDSO60760 199 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 LILRB3O75022 631 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 FKTNO75072 461 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CPNE3O75131 537 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF780AO75290 641 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR2B3O76000 313 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SOX30O94993 753 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RCBTB2O95199 551 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RECKO95980 971 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SOD1P00441 154 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 AK1P00568 194 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 IFNA7P01567 189 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 IGHA1P01876 353 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MT-ND5P03915 603 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CSF2P04141 144 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PCCBP05166 539 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 HMGN2P05204 90 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CTSLP07711 333 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RHOP08100 348 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CHRM4P08173 479 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 IGFBP1P08833 259 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CLTBP09497 229 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CLEC2LP0C7M8 214 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PRR23D2P0DMB1 279 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CHRNB1P11230 501 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ERGP11308 486 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ANXA3P12429 323 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ACP5P13686 325 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 GNSP15586 552 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ARSBP15848 533 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SYN1P17600 705 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 BMP7P18075 431 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CELP19835 753 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ALAS2P22557 587 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms