RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 MAGP20916 626 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 TGM1P22735 817 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 TLX1P31314 330 aaPredicted RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 ZNF45Q02386 682 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 PRKCDQ05655 676 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 DLX2Q07687 328 aaPredicted RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 LTB4RQ15722 352 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 SOWAHCQ53LP3 525 aaPredicted RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 SYT14P1Q58G82 188 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 MFSD12Q6NUT3 480 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 USP53Q70EK8 1073 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 HMGN2P46Q86SG4 172 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 VRK2Q86Y07 508 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 CAMKVQ8NCB2 501 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 DIO2Q92813 273 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 ZG16BQ96DA0 208 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 MTHFD2LQ9H903 347 aaPredicted RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 HHATLQ9HCP6 504 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 MRPS18AQ9NVS2 196 aaKnown RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 DAPP1Q9UN19 280 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 CFL2Q9Y281 166 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 CHST2Q9Y4C5 530 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 UGT2A1Q9Y4X1 527 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 LRRC72A6NJI9 287 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 B3GALT2O43825 422 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 KIAA0513O60268 411 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 CTSVO60911 334 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 RASGRP1O95267 797 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 ZNF10P21506 573 aaPredicted RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 CDH3P22223 829 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 SOX6P35712 828 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 TSPAN31Q12999 210 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 PERM1Q5SV97 790 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 FCRL6Q6DN72 434 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 ACSM5Q6NUN0 579 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 FIGLAQ6QHK4 219 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 SLC34A3Q8N130 599 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 OR2L13Q8N349 312 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 IQCF1Q8N6M8 205 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 OR7G2Q8NG99 324 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 ITFG2Q969R8 447 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 MCOLN1Q9GZU1 580 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 RNF167Q9H6Y7 350 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 ANKRA2Q9H9E1 313 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 SIAEQ9HAT2 523 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 PTGFRNQ9P2B2 879 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 TESQ9UGI8 421 aaKnown RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 DIMT1Q9UNQ2 313 aaKnown RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 PEX16Q9Y5Y5 336 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 CSO75390 466 aaKnown RBP14.11□□□□□ -0.15
LDLR-202ENST00000455727 S100A5P33763 92 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 TPMTP51580 245 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 LSM11P83369 360 aaKnown RBP eCLIP14.11□□□□□ -0.15
LDLR-202ENST00000455727 ALG11Q2TAA5 492 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 C6orf132Q5T0Z8 1188 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 KIAA1324Q6UXG2 1013 aaKnown RBP14.11□□□□□ -0.15
LDLR-202ENST00000455727 RASSF6Q6ZTQ3 369 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 TRIM73Q86UV7 250 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 KIF18BQ86Y91 864 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 CYP4Z2PQ8N1L4 340 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 TOR1AIP2Q8NFQ8 470 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 OR52P1PQ8NH57 321 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 C6orf62Q9GZU0 229 aaPredicted RBP14.11□□□□□ -0.15
LDLR-202ENST00000455727 LYRM4Q9HD34 91 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 CD93Q9NPY3 652 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 ACTR10Q9NZ32 417 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 CLEC2DQ9UHP7 191 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 GPR55Q9Y2T6 319 aaPredicted RBP14.11□□□□□ -0.15
LDLR-202ENST00000455727 HS3ST3A1Q9Y663 406 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 SLC22A7Q9Y694 548 aa14.11□□□□□ -0.15
LDLR-202ENST00000455727 TRBV23OR9-2A0A075B6M9 112 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 IRGMA1A4Y4 181 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 NARSO43776 548 aaKnown RBP14.1□□□□□ -0.15
LDLR-202ENST00000455727 UPK1BO75841 260 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 ZIC2O95409 532 aaPredicted RBP14.1□□□□□ -0.15
LDLR-202ENST00000455727 CCNYL3P0C7X3 344 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 NDUFV2P19404 249 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 AKT2P31751 481 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 MLLT11Q13015 90 aaPredicted RBP14.1□□□□□ -0.15
LDLR-202ENST00000455727 RUNX2Q13950 521 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 DOC2BQ14184 412 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 ZNF181Q2M3W8 571 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 ARHGAP11BQ3KRB8 267 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 KLHL22Q53GT1 634 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 SLC27A4Q6P1M0 643 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 FAM111BQ6SJ93 734 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 PLEKHG7Q6ZR37 379 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 ABHD13Q7L211 337 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 SLC16A11Q8NCK7 471 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 RSC1A1Q92681 617 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 LRR1Q96L50 414 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 ZNF582Q96NG8 517 aaPredicted RBP14.1□□□□□ -0.15
LDLR-202ENST00000455727 C8orf33Q9H7E9 229 aaPredicted RBP14.1□□□□□ -0.15
LDLR-202ENST00000455727 POLMQ9NP87 494 aaPredicted RBP14.1□□□□□ -0.15
LDLR-202ENST00000455727 SEMA4GQ9NTN9 838 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 SEC14L4Q9UDX3 406 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 ENTPD2Q9Y5L3 495 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 PIAS3Q9Y6X2 628 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 FAM221BA6H8Z2 402 aa14.1□□□□□ -0.15
LDLR-202ENST00000455727 SNTNA6NMZ2 147 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms