RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 VMACQ2NL98 169 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 DEFB110Q30KQ9 67 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ZNF324BQ6AW86 544 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 GLYATQ6IB77 296 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CDC73Q6P1J9 531 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 KIRREL2Q6UWL6 708 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 RBM44Q6ZP01 1051 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 ASB18Q6ZVZ8 466 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 WDR53Q7Z5U6 358 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 TMEM132CQ8N3T6 1108 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 SVOPLQ8N434 492 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CBR4Q8N4T8 237 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 SGCDQ92629 289 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 EXT2Q93063 718 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 TMIGD2Q96BF3 282 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 PYURFQ96I23 114 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 LRGUKQ96M69 825 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 TIMP4Q99727 224 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CIB1Q99828 191 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ADI1Q9BV57 179 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CHID1Q9BWS9 393 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 TAPBPLQ9BX59 468 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 UBQLN3Q9H347 655 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ACTR8Q9H981 624 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 DDX18Q9NVP1 670 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 C5AR2Q9P296 337 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 DNAJB9Q9UBS3 223 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CHCHD2Q9Y6H1 151 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 TRBV23OR9-2A0A075B6M9 112 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 A0A1W2PQD3 144 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CXCR6O00574 342 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 PCDH17O14917 1159 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 GLSO94925 669 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 ANXA4P09525 319 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 EFNA1P20827 205 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 PAX7P23759 505 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 GP2P55259 537 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 MAT1AQ00266 395 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 IL18R1Q13478 541 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 MAPK14Q16539 360 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 LSRQ86X29 649 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 MARCH9Q86YJ5 346 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ST13P4Q8IZP2 240 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 MDS2Q8NDY4 140 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 OR51Q1Q8NH59 317 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 OR10G6Q8NH81 332 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 TMBIM1Q969X1 311 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CCDC124Q96CT7 223 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 JAM3Q9BX67 310 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 MMP25Q9NPA2 562 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 MKKSQ9NPJ1 570 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 PNPLA3Q9NST1 481 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 TAS2R9Q9NYW1 312 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 EGFL7Q9UHF1 273 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 DSPP15924 2871 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 SHANK1Q9Y566 2161 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 OR2W5A6NFC9 320 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 RDH16O75452 317 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 UGT2B17O75795 530 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 MT-CO3P00414 261 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ZGLP1P0C6A0 271 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 FCGR1AP12314 374 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ENDOUP21128 410 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 CD82P27701 267 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 HTR2AP28223 471 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 GPC1P35052 558 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 KCNK10P57789 538 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 VSX2P58304 361 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 EIF3IQ13347 325 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 DAG1Q14118 895 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 PLCL1Q15111 1095 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 TRIP10Q15642 601 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CACHD1Q5VU97 1274 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 WDR88Q6ZMY6 472 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ABHD13Q7L211 337 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ADGRE4PQ86SQ3 457 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CLEC4FQ8N1N0 589 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 PARP8Q8N3A8 854 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 LRRC75AQ8NAA5 344 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 KDF1Q8NAX2 398 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 OR7G1Q8NGA0 311 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 OR1N1Q8NGS0 311 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 NUBPLQ8TB37 319 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 GANCQ8TET4 914 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 SLC38A5Q8WUX1 472 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ZG16BQ96DA0 208 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 FBXL20Q96IG2 436 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 RSRC1Q96IZ7 334 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 KCTD14Q9BQ13 255 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 DUSP26Q9BV47 211 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ROGDIQ9GZN7 287 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 OSGEPL1Q9H4B0 414 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 ANKRA2Q9H9E1 313 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 GPN2Q9H9Y4 310 aaPredicted RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 PDE7BQ9NP56 450 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 POLE3Q9NRF9 147 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 FGF21Q9NSA1 209 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 MRPS18AQ9NVS2 196 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 A4GNTQ9UNA3 340 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 LYVE1Q9Y5Y7 322 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms