RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SPATA19Q7Z5L4 167 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 FGD2Q7Z6J4 655 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 GHDCQ8N2G8 530 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 FAM26EQ8N5C1 309 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 TMEM251Q8N6I4 163 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 SFXN5Q8TD22 340 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 STON2Q8WXE9 905 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 TMBIM1Q969X1 311 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 FAM120BQ96EK7 910 aaKnown RBP13□□□□□ -0.33
HDAC4-205ENST00000454542 DUSP26Q9BV47 211 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 TSPAN10Q9H1Z9 355 aaPredicted RBP13□□□□□ -0.33
HDAC4-205ENST00000454542 GPR45Q9Y5Y3 372 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 USH1CQ9Y6N9 552 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 NCKAP5O14513 1909 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 RP1L1Q8IWN7 2480 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 A0A1W2PRB8 838 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 NPIPA5E9PKD4 350 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 ACOT7O00154 380 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 RNASET2O00584 256 aaKnown RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 EMC8O43402 210 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 ASNA1O43681 348 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 HS6ST1O60243 411 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 C6orf47O95873 294 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 IGHG3P01860 377 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 EFNA1P20827 205 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 GPC1P35052 558 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 CASP3P42574 277 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 MRPL19P49406 292 aaKnown RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 CLNS1AP54105 237 aaKnown RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 SNTA1Q13424 505 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 ELOAQ14241 798 aaKnown RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 CYP27C1Q4G0S4 372 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 FNDC7Q5VTL7 733 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 BICRALQ6AI39 1079 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 DESI1Q6ICB0 168 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 MFSD12Q6NUT3 480 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 ZCCHC12Q6PEW1 402 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 SLC22A16Q86VW1 577 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 FAM109AQ8N4B1 249 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 NUP43Q8NFH3 380 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 OR4N2Q8NGD1 307 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 DIO2Q92813 273 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 TMEM41AQ96HV5 264 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 ZNF597Q96LX8 424 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 MAGEB18Q96M61 343 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 RILPQ96NA2 401 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 COL21A1Q96P44 957 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 NODALQ96S42 347 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 PRPF18Q99633 342 aaKnown RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 DOHHQ9BU89 302 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 DPY30Q9C005 99 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 UBQLN3Q9H347 655 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 CXorf36Q9H7Y0 433 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 ZFP64Q9NPA5 681 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 QPCTLQ9NXS2 382 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 BOKQ9UMX3 212 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 NPIPA1Q9UND3 350 aa12.99□□□□□ -0.33
HDAC4-205ENST00000454542 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.99□□□□□ -0.33
HDAC4-205ENST00000454542 GOLGA8QA0A0J9YX86 632 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 GOLGA8OA6NCC3 632 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 PRAMEF25A6NGN4 478 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 E9PBE3 544 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 GOLGA8NF8WBI6 632 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 SEMA7AO75326 666 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 SNX4O95219 450 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 TGDSO95455 350 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 ACP2P11117 423 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 KIR3DL1P43629 444 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 PNLIPRP2P54317 469 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 PPIAP62937 165 aaKnown RBP12.98□□□□□ -0.33
HDAC4-205ENST00000454542 KCNJ2P63252 427 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 HBA1P69905 142 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 PHC1P78364 1004 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 PRR5P85299 388 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 EFR3AQ14156 821 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.98□□□□□ -0.33
HDAC4-205ENST00000454542 PDCD4Q53EL6 469 aaKnown RBP12.98□□□□□ -0.33
HDAC4-205ENST00000454542 C4orf17Q53FE4 359 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 OR4F3Q6IEY1 312 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 EPGNQ6UW88 154 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 SLC44A2Q8IWA5 706 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-205ENST00000454542 CDRT4Q8N9R6 151 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 OR52N2Q8NGI0 321 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 OR5M3Q8NGP4 307 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 CEP70Q8NHQ1 597 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 DYDC1Q8WWB3 177 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 MOAP1Q96BY2 351 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 TEX37Q96LM6 180 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 OR52B2Q96RD2 323 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 OSBPL11Q9BXB4 747 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 Q9N2J8 555 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 ERRFI1Q9UJM3 462 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-205ENST00000454542 LIPGQ9Y5X9 500 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 LRRK2Q5S007 2527 aa12.98□□□□□ -0.33
HDAC4-205ENST00000454542 A0A1B0GVC2 190 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 WIPF3A6NGB9 483 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 FAM166BA8MTA8 275 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 SNPHO15079 494 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 SLC19A2O60779 497 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 IL33O95760 270 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms