RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 NECTIN3Q9NQS3 549 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 FAIMQ9NVQ4 179 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 NLGN3Q9NZ94 848 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 HCN3Q9P1Z3 774 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 NFKBIL1Q9UBC1 381 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 RPL36Q9Y3U8 105 aaKnown RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 ASXL3Q9C0F0 2248 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 IGKV1-8A0A0C4DH67 115 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 CASKO14936 926 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 PRKYO43930 277 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 SEMA3DO95025 777 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 BMP7P18075 431 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 KCNJ5P48544 419 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 CSNK2BP67870 215 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 ACSM5Q6NUN0 579 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 ZNF438Q7Z4V0 828 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 CYP4Z2PQ8N1L4 340 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 FBXO15Q8NCQ5 510 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 DENND6BQ8NEG7 585 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 OR51G2Q8NGK0 314 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 PIGXQ8TBF5 258 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 FCGR1BQ92637 280 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 TMEM80Q96HE8 168 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 COX14Q96I36 57 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 TM9SF2Q99805 663 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 HDHD5Q9BXW7 423 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 PLXNA4Q9HCM2 1894 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 FAAHO00519 579 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 ARHGAP33O14559 1287 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 EMC8O43402 210 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SDC3O75056 442 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 DRD2P14416 443 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 HOXB9P17482 250 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 CELP19835 753 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 GABRA3P34903 492 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 PDX1P52945 283 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 DEFA1P59665 94 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 DEFA3P59666 94 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 CXCR4P61073 352 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 ZNF91Q05481 1191 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 PDE7AQ13946 482 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 GPR18Q14330 331 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 GNA13Q14344 377 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SUZ12Q15022 739 aaKnown RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 LARS2Q15031 903 aaKnown RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SAXO2Q658L1 398 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 ZER1Q7Z7L7 766 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 LAPTM4BQ86VI4 370 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 NRROSQ86YC3 692 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 CYB561A3Q8NBI2 242 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 RAB11FIP5Q9BXF6 653 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SERHL2Q9H4I8 314 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 MRPS7Q9Y2R9 242 aaKnown RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 VCANP13611 3396 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 A0A1W2PPK0 400 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 C4orf51C9J302 202 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 M0R082 166 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SNPHO15079 494 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 CTHP32929 405 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 IFNGR2P38484 337 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 PLAG1Q6DJT9 500 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 RNF44Q7L0R7 432 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 NKAIN4Q8IVV8 208 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 OR10H4Q8NGA5 316 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 UBASH3BQ8TF42 649 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SLX1AQ9BQ83 275 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 MED20Q9H944 212 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SIRT3Q9NTG7 399 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 PTGFRNQ9P2B2 879 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 GPR55Q9Y2T6 319 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 GPC6Q9Y625 555 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 GBF1Q92538 1859 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 FAM25AB3EWG3 89 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 FAM25CB3EWG5 89 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 FAM25GB3EWG6 89 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 TBX6O95947 436 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 ADAP00813 363 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 CSF2P04141 144 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 HPGDP15428 266 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 S100A1P23297 94 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 GIPRP48546 466 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 CDH11P55287 796 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 FAM214AQ32MH5 1076 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 MINDY4Q4G0A6 757 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 PGBD2Q6P3X8 592 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 OR4F15Q8NGB8 312 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 OR56A1Q8NGH5 318 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 OR2L8Q8NGY9 312 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 SMAP2Q8WU79 429 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 FCRL1Q96LA6 429 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 TEX101Q9BY14 249 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 DPH1Q9BZG8 443 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 GABARAPL1Q9H0R8 117 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 LHX9Q9NQ69 397 aa11.25□□□□□ -0.61
SMPD4-213ENST00000454468 USP36Q9P275 1121 aaKnown RBP11.25□□□□□ -0.61
SMPD4-213ENST00000454468 RDH16O75452 317 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms