RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 IGFBPL1Q8WX77 278 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CDKL2Q92772 493 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 WNT2BQ93097 391 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ISL2Q96A47 359 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EXOSC8Q96B26 276 aaKnown RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CTHRC1Q96CG8 243 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 STARD4Q96DR4 205 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PHF21BQ96EK2 531 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CNRIP1Q96F85 164 aaPredicted RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NPAS1Q99742 590 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TM9SF2Q99805 663 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KLHDC3Q9BQ90 382 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PINK1Q9BXM7 581 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EBPLQ9BY08 206 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KLHL4Q9C0H6 718 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TMEM185BQ9H7F4 350 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 IPPKQ9H8X2 491 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CALHM2Q9HA72 323 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RRAGDQ9NQL2 400 aaPredicted RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NSMCE4AQ9NXX6 385 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 XPR1Q9UBH6 696 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC12A4Q9UP95 1085 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FREM1Q5H8C1 2179 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 A0A096LPK6 155 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FRG2CA6NGY1 282 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RNF223E7ERA6 249 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 H0YIV9 168 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HCRTR2O43614 444 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 REM1O75628 298 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NTN1O95631 604 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ALDOAP04075 364 aaKnown RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C2P06681 752 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 THBDP07204 575 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 IL3P08700 152 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 POU2F1P14859 743 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CPN1P15169 458 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PORP16435 677 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TCP1P17987 556 aaKnown RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CRYGSP22914 178 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PTX3P26022 381 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DPP4P27487 766 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 IL12BP29460 328 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GCKP35557 465 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CD79BP40259 229 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KIR2DL2P43627 348 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EMDP50402 254 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HTR6P50406 440 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CCNG1P51959 295 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ALDH18A1P54886 795 aaKnown RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DIO3P55073 304 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CDH13P55290 713 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ATP5J2P56134 94 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GNG11P61952 73 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TNK1Q13470 666 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CUL3Q13618 768 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 VEZF1Q14119 521 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PON3Q15166 354 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ACKR1Q16570 336 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TECRLQ5HYJ1 363 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LGSNQ5TDP6 509 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FRG2Q64ET8 278 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TTC19Q6DKK2 380 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC48A1Q6P1K1 146 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ENPP6Q6UWR7 440 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF704Q6ZNC4 412 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C3orf62Q6ZUJ4 267 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LARP4Q71RC2 724 aaKnown RBP eCLIP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PLCZ1Q86YW0 608 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 WFDC8Q8IUA0 241 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PHC2Q8IXK0 858 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C1orf52Q8N6N3 182 aaKnown RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR4K17Q8NGC6 315 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC9A6Q92581 669 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NEUROG1Q92886 237 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TP53INP1Q96A56 240 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OTUB1Q96FW1 271 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PGM2Q96G03 612 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LCORQ96JN0 433 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 COL21A1Q96P44 957 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GPR78Q96P69 363 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FRG2BQ96QU4 278 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SECISBP2Q96T21 854 aaKnown RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 VPS11Q9H270 941 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NMRAL1Q9HBL8 299 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZBTB26Q9HCK0 441 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PCTPQ9UKL6 214 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CES1P1Q9UKY3 287 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EXO1Q9UQ84 846 aaKnown RBP5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PCDHGA11Q9Y5H2 935 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PCDHA9Q9Y5H5 950 aa5.4□□□□□ -1.54
HLA-DPA3-207ENST00000454398 A0A087X1B8 175 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 UQCRHLA0A096LP55 91 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 GOLGA6L10A6NI86 522 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 SYCE1LA8MT33 242 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 RNF212BA8MTL3 300 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CES2O00748 559 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 MSTNO14793 375 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 CLOCKO15516 846 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 ZIC3O60481 467 aa5.39□□□□□ -1.55
HLA-DPA3-207ENST00000454398 NDUFS7O75251 213 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms