RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 SLC44A2Q8IWA5 706 aaPredicted RBP9.76□□□□□ -0.85
DDX39A-203ENST00000454233 DDIASQ8IXT1 998 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 OR7G2Q8NG99 324 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.76□□□□□ -0.85
DDX39A-203ENST00000454233 AENQ8WTP8 325 aaKnown RBP9.76□□□□□ -0.85
DDX39A-203ENST00000454233 CAVIN3Q969G5 261 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 SLC35A4Q96G79 324 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 VSTM2LQ96N03 204 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 ADOQ96SZ5 270 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 TIMP4Q99727 224 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 CCT7Q99832 543 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 TRIM8Q9BZR9 551 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 UCK2Q9BZX2 261 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 ENKD1Q9H0I2 346 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 GALNT9Q9HCQ5 603 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 DDX18Q9NVP1 670 aaKnown RBP9.76□□□□□ -0.85
DDX39A-203ENST00000454233 SLC17A7Q9P2U7 560 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 MAPRE3Q9UPY8 281 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 EXO1Q9UQ84 846 aaKnown RBP9.76□□□□□ -0.85
DDX39A-203ENST00000454233 SLC6A5Q9Y345 797 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 CCL27Q9Y4X3 112 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 NCKAP5O14513 1909 aa9.76□□□□□ -0.85
DDX39A-203ENST00000454233 A0A0G2JNJ9 132 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 C2orf72A6NCS6 295 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 HSPB2A8KAH6 182 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 PLOD2O00469 737 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 TSPAN2O60636 221 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 NME6O75414 186 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 CBR3O75828 277 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 TOXO94900 526 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 FREM3P0C091 2139 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 LINC00032P0C843 101 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 PTGDSP41222 190 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 MC3RP41968 323 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 PNLIPRP2P54317 469 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 KIAA0040Q15053 153 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 HSPB2Q16082 182 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 PRSS53Q2L4Q9 553 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 EIPR1Q53HC9 387 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 WIPI1Q5MNZ9 446 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 SH2D4BQ5SQS7 431 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 KANK2Q63ZY3 851 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 VASNQ6EMK4 673 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 TMEM107Q6UX40 140 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 NPSR1Q6W5P4 371 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 CLYBLQ8N0X4 340 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 FAM83FQ8NEG4 500 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 OR14L1PQ8NHC6 308 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 ZFP28Q8NHY6 868 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 TCP10LQ8TDR4 215 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 TWIST2Q8WVJ9 160 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 ABTB1Q969K4 478 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 GFM2Q969S9 779 aaKnown RBP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 NTNG2Q96CW9 530 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 C14orf79Q96F83 325 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 EGLN2Q96KS0 407 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 AMDHD1Q96NU7 426 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 MECRQ9BV79 373 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 GLIPR2Q9H4G4 154 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 SERHLQ9NQF3 203 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 Q9UFV3 132 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 MRTO4Q9UKD2 239 aaKnown RBP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 C19orf53Q9UNZ5 99 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 CAMK2AQ9UQM7 478 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 TMED5Q9Y3A6 229 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 TRAF6Q9Y4K3 522 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 DNAJC15Q9Y5T4 150 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 WIF1Q9Y5W5 379 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 PTGDR2Q9Y5Y4 395 aa9.75□□□□□ -0.85
DDX39A-203ENST00000454233 V9GYY5 206 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-203ENST00000454233 UPK1AO00322 258 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 PDPK1O15530 556 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 ZNF500O60304 480 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-203ENST00000454233 EPPINO95925 133 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 ACTL6AO96019 429 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 CHRNGP07510 517 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 FGF4P08620 206 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 IFI6P09912 130 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 DDX5P17844 614 aaKnown RBP9.74□□□□□ -0.85
DDX39A-203ENST00000454233 BMP7P18075 431 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 TACR1P25103 407 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 MSX1P28360 303 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 MAPK1P28482 360 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 GPC1P35052 558 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 SERPINB5P36952 375 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 ADH7P40394 386 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 ASMTP46597 345 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 RPL38P63173 70 aaKnown RBP9.74□□□□□ -0.85
DDX39A-203ENST00000454233 RCAN2Q14206 197 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 DECR1Q16698 335 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 SLC25A35Q3KQZ1 300 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 KRT71Q3SY84 523 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 GALNTL6Q49A17 601 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 CYP27C1Q4G0S4 372 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 ACSF3Q4G176 576 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-203ENST00000454233 ARL13AQ5H913 290 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-203ENST00000454233 NHSL2Q5HYW2 709 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 ENPP6Q6UWR7 440 aa9.74□□□□□ -0.85
DDX39A-203ENST00000454233 Q6ZSR9 355 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms