RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 OR51J1Q9H342 316 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 KCNK12Q9HB15 430 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 PCDHA9Q9Y5H5 950 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 PPP6CO00743 305 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 C21orf33P30042 268 aaPredicted RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 PLBD1Q6P4A8 553 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 LSMEM2Q8N112 164 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ZSCAN4Q8NAM6 433 aaPredicted RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 LMX1AQ8TE12 382 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ELMOD3Q96FG2 381 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 TMEM168Q9H0V1 697 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 RGCCQ9H4X1 137 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 CLMPQ9H6B4 373 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 OR2S2Q9NQN1 319 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 RXFP3Q9NSD7 469 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 KLHL21Q9UJP4 597 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 EDARQ9UNE0 448 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 GPR52Q9Y2T5 361 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 A0A0G2JMP0 313 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 MBLAC1A4D2B0 266 aaPredicted RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 CSTAP01040 98 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 GABRA3P34903 492 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ZNF41P51814 821 aaPredicted RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ELAVL3Q14576 367 aaKnown RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 MORN1Q5T089 497 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 FRMPD2BQ6IN97 320 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 FIP1L1Q6UN15 594 aaKnown RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ACVR1CQ8NER5 493 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 OR4M2Q8NGB6 313 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 TMEM234Q8WY98 164 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 S100PBPQ96BU1 408 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 FAM46AQ96IP4 442 aaKnown RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 NEDD4LQ96PU5 975 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 HRASLS2Q9NWW9 162 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 TEX10Q9NXF1 929 aaPredicted RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 PTTG3PQ9NZH4 202 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 NPAP1Q9NZP6 1156 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ANKRD12Q6UB98 2062 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 A8MU76 341 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 TFP02787 698 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 TYRP1P17643 537 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 PFKLP17858 780 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ENDOUP21128 410 aaKnown RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 APOFQ13790 326 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 PRRT3Q5FWE3 981 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 SPIN3Q5JUX0 258 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 WDR53Q7Z5U6 358 aaPredicted RBP11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ASPGQ86U10 573 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ARHGAP12Q8IWW6 846 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 TOR1AIP2Q8NFQ8 470 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 OR7G3Q8NG95 312 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 THSD1Q9NS62 852 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 SLCO3A1Q9UIG8 710 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 TIAM2Q8IVF5 1701 aa11.43□□□□□ -0.58
SEC16A-207ENST00000453963 ZNF705EA8MWA4 302 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 HSPA12AO43301 675 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SPARCP09486 303 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 BMP4P12644 408 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 POLR2CP19387 275 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 CASP3P42574 277 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 RGS19P49795 217 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 HERV-K104P61576 105 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 MLLT11Q13015 90 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 RNASE10Q5GAN6 216 aaKnown RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 WDR45BQ5MNZ6 344 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 TMEM107Q6UX40 140 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 ZNF551Q7Z340 670 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 NRMQ8IXM6 262 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 GGHQ92820 318 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 ZBED3Q96IU2 234 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 MRPL15Q9P015 296 aaKnown RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 HEMK1Q9Y5R4 338 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 TRAPPC13A5PLN9 417 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 RTCAO00442 366 aaKnown RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SOX9P48436 509 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 VEGFBP49765 207 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 MRPS10P82664 201 aaKnown RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 ID2Q02363 134 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 TAP2Q03519 686 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 RAB33AQ14088 237 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 FAM69AQ5T7M9 428 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 OR4C11Q6IEV9 310 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SHFQ7M4L6 423 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 PNPLA1Q8N8W4 532 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SIMC1Q8NDZ2 872 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SMARCD2Q92925 531 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 UBXN10Q96LJ8 280 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 OR2M4Q96R27 311 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 THAP7Q9BT49 309 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SAV1Q9H4B6 383 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 MTHFD2LQ9H903 347 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 KLHL42Q9P2K6 505 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 MAFFQ9ULX9 164 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 ARPC4-TTLL3A0A0A6YYG9 625 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 RNF13O43567 381 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 CNMDO75829 334 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 JUNBP17275 347 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 CDKN2CP42773 168 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 CRYZQ08257 329 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms