RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TCHHL1Q5QJ38 904 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-210ENST00000453030 C8orf74Q6P047 294 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 AAGABQ6PD74 315 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 P4HA3Q7Z4N8 544 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 ADGRE4PQ86SQ3 457 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 PLCZ1Q86YW0 608 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 UBQLNLQ8IYU4 475 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 C17orf53Q8N3J3 647 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-210ENST00000453030 OR9A2Q8NGT5 310 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 TRPC4APQ8TEL6 797 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 SMPDL3BQ92485 455 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 KAT2AQ92830 837 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 WNT2BQ93097 391 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 ISL2Q96A47 359 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 CTHRC1Q96CG8 243 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 TMCO6Q96DC7 493 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 ADOQ96SZ5 270 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 FAIM2Q9BWQ8 316 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 ACBD3Q9H3P7 528 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 BEX4Q9NWD9 120 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-210ENST00000453030 C6orf203Q9P0P8 240 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-210ENST00000453030 UTS2RQ9UKP6 389 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 PACSIN3Q9UKS6 424 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 PSME2Q9UL46 239 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 TMCO1Q9UM00 188 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 EIF3LQ9Y262 564 aaKnown RBP10.59□□□□□ -0.71
GARNL3-210ENST00000453030 CSPG4Q6UVK1 2322 aa10.59□□□□□ -0.71
GARNL3-210ENST00000453030 PRR14LQ5THK1 2151 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 A0A1W2PNV4 684 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 OR6C70A6NIJ9 312 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 A8MT66 165 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 B4DXG7 233 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 CASKO14936 926 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 TO15178 435 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 TNFSF13O75888 250 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 OR4F21O95013 312 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 TGM6O95932 706 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 IL3P08700 152 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 DRD5P21918 477 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 GRK2P25098 689 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 SRD5A2P31213 254 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 KRT20P35900 424 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 DIO3P55073 304 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 CLDN18P56856 261 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 ERCC6LQ2NKX8 1250 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 TSNAXIP1Q2TAA8 658 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF628Q5EBL2 1059 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 Q5PR19 223 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 VWA1Q6PCB0 445 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 SCIMPQ6UWF3 145 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 CLEC9AQ6UXN8 241 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 NPSR1Q6W5P4 371 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 TAOK1Q7L7X3 1001 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 CCDC116Q8IYX3 515 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 CNEP1R1Q8N9A8 125 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF483Q8TF39 744 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-210ENST00000453030 EXOSC8Q96B26 276 aaKnown RBP10.58□□□□□ -0.72
GARNL3-210ENST00000453030 EFHD2Q96C19 240 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF681Q96N22 645 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 BTBD9Q96Q07 612 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 PAFAH2Q99487 392 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 PIGMQ9H3S5 423 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF395Q9H8N7 513 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-210ENST00000453030 BRF2Q9HAW0 419 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 ZDHHC18Q9NUE0 388 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 KLHL28Q9NXS3 571 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 HEY2Q9UBP5 337 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 NDRG3Q9UGV2 375 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 SNX6Q9UNH7 406 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 TESMINQ9Y4I5 508 aa10.58□□□□□ -0.72
GARNL3-210ENST00000453030 A8MXE2 369 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 SIAH2O43255 324 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 SCO2O43819 266 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 PCDH7O60245 1069 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 CT45A8P0DMV1 189 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 CT45A9P0DMV2 189 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 CHN1P15882 459 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF708P17019 499 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 DPP4P27487 766 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 SIRPAP78324 504 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 FAM27E3Q08E93 113 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF155Q12901 538 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-210ENST00000453030 GAB1Q13480 694 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 EFR3AQ14156 821 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 CT45A2Q5DJT8 189 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 SYT10Q6XYQ8 523 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 LARP4Q71RC2 724 aaKnown RBP eCLIP10.57□□□□□ -0.72
GARNL3-210ENST00000453030 CXorf67Q86X51 503 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-210ENST00000453030 CDYL2Q8N8U2 506 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 OR4K17Q8NGC6 315 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF675Q8TD23 568 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF592Q92610 1267 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 SLC35A4Q96G79 324 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 VSTM2LQ96N03 204 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 FAM111AQ96PZ2 611 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 UCN2Q96RP3 112 aa10.57□□□□□ -0.72
GARNL3-210ENST00000453030 MRPL46Q9H2W6 279 aaKnown RBP10.57□□□□□ -0.72
GARNL3-210ENST00000453030 CDC42EP4Q9H3Q1 356 aaKnown RBP10.57□□□□□ -0.72
GARNL3-210ENST00000453030 UBTD1Q9HAC8 227 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms