RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ANKRD33Q7Z3H0 272 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CPEB2Q7Z5Q1 589 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC26A11Q86WA9 606 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CATSPERDQ86XM0 798 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 RNF130Q86XS8 419 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 ARHGAP18Q8N392 663 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 GCSAMQ8N6F7 178 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CYB561A3Q8NBI2 242 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 MFSD9Q8NBP5 474 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC38A9Q8NBW4 561 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF248Q8NDW4 579 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SDR9C7Q8NEX9 313 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 ABHD11Q8NFV4 315 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR5AU1Q8NGC0 362 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR4K1Q8NGD4 311 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR4D5Q8NGN0 318 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SPATA22Q8NHS9 363 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 TMEM37Q8WXS4 190 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 DNAAF4Q8WXU2 420 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SMPDL3BQ92485 455 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 FUBP1Q96AE4 644 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM131CQ96AQ9 280 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 PHF21AQ96BD5 680 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 KAZALD1Q96I82 304 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 C3orf30Q96M34 536 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CCDC3Q9BQI4 270 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SYT11Q9BT88 431 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 FUCA2Q9BTY2 467 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 DUSP16Q9BY84 665 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 PARD6GQ9BYG4 376 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 DERL2Q9GZP9 239 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 ILKAPQ9H0C8 392 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SEMA6AQ9H2E6 1030 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 ESRP2Q9H6T0 727 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 GKN1Q9NS71 199 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 PARPBPQ9NWS1 579 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 C1orf123Q9NWV4 160 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 GNG12Q9UBI6 72 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 LNPEPQ9UIQ6 1025 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 EMCNQ9ULC0 261 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SCML1Q9UN30 329 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 STARD10Q9Y365 291 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 LOXL2Q9Y4K0 774 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 TNFRSF18Q9Y5U5 241 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 MAP3K15Q6ZN16 1313 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 FRG2CA6NGY1 282 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 LRRC30A6NM36 301 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 C17orf105B2RV13 164 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 E7ESA3 106 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 PRAMEF26H0Y7S4 382 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 RAB29O14966 203 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 FOXN1O15353 648 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SPINT2O43291 252 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CYTH3O43739 400 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 NXPH3O95157 252 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SERPINE2P07093 398 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CT45A8P0DMV1 189 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CT45A9P0DMV2 189 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CTSAP10619 480 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ENGP17813 658 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ACRV1P26436 265 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 GJB2P29033 226 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 AVPR1AP37288 418 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 P2RY2P41231 377 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC1A2P43004 574 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC1A4P43007 532 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CRYBB2P43320 205 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 GYG1P46976 350 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 GLIPR1P48060 266 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 RFX3P48380 749 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 MNAT1P51948 309 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 OSTNP61366 133 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ERVK-8P63133 956 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZXDAP98168 799 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 OGDHQ02218 1023 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SP3Q02447 781 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 HHEXQ03014 270 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CHRNB3Q05901 458 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ORC2Q13416 577 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 GK3PQ14409 553 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 KPNB1Q14974 876 aaKnown RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CYTH1Q15438 398 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 MOGQ16653 247 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZSWIM7Q19AV6 140 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 GLYR1Q49A26 553 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPR33Q49SQ1 333 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CT45A2Q5DJT8 189 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF542PQ5EBM4 170 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 LYPLAL1Q5VWZ2 237 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SP5Q6BEB4 398 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 LAIR1Q6GTX8 287 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 THOC7Q6I9Y2 204 aaKnown RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 LCN10Q6JVE6 187 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CDC42EP5Q6NZY7 148 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 DUS1LQ6P1R4 473 aaKnown RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ULK3Q6PHR2 472 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 LRRC74BQ6ZQY2 392 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 C19orf35Q6ZS72 473 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 USP50Q70EL3 339 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 UTS2BQ765I0 119 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms