RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 WIPI1Q5MNZ9 446 aaPredicted RBP11.76□□□□□ -0.53
CHD3-206ENST00000452447 TRIM46Q7Z4K8 759 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 YRDCQ86U90 279 aaKnown RBP11.76□□□□□ -0.53
CHD3-206ENST00000452447 LACC1Q8IV20 430 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 FAM83FQ8NEG4 500 aaPredicted RBP11.76□□□□□ -0.53
CHD3-206ENST00000452447 FAM76AQ8TAV0 307 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 EPS8L3Q8TE67 593 aaKnown RBP11.76□□□□□ -0.53
CHD3-206ENST00000452447 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHD3-206ENST00000452447 ABTB1Q969K4 478 aaPredicted RBP11.76□□□□□ -0.53
CHD3-206ENST00000452447 DTNBP1Q96EV8 351 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 LRRC46Q96FV0 321 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 BTBD9Q96Q07 612 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 ADOQ96SZ5 270 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 PRDM14Q9GZV8 571 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 GALNT9Q9HCQ5 603 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 OXSMQ9NWU1 459 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 KCNN3Q9UGI6 736 aa11.76□□□□□ -0.53
CHD3-206ENST00000452447 EXO1Q9UQ84 846 aaKnown RBP11.76□□□□□ -0.53
CHD3-206ENST00000452447 POLR3HQ9Y535 204 aaPredicted RBP11.76□□□□□ -0.53
CHD3-206ENST00000452447 MED13LQ71F56 2210 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 DVL2O14641 736 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 COQ9O75208 318 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 RSL1D1O76021 490 aaKnown RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 JUNP05412 331 aaKnown RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 CT45A8P0DMV1 189 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 CT45A9P0DMV2 189 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 UROSP10746 265 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 BMP5P22003 454 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 PTGDSP41222 190 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 NCBP2P52298 156 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHD3-206ENST00000452447 CORO7P57737 925 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 EFR3AQ14156 821 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 CT45A2Q5DJT8 189 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 NHSL2Q5HYW2 709 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 LIPMQ5VYY2 423 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 SEM1Q6ZVN7 128 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 MED12LQ86YW9 2145 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 C4orf33Q8N1A6 199 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 OR7G2Q8NG99 324 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 OR14L1PQ8NHC6 308 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 NTNG2Q96CW9 530 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 SLC35A4Q96G79 324 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 VSTM2LQ96N03 204 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 UGT2B28Q9BY64 529 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 IQCGQ9H095 443 aaKnown RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 FOLH1BQ9HBA9 442 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 SERHLQ9NQF3 203 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 MID2Q9UJV3 735 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 WBP11Q9Y2W2 641 aaKnown RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 OR10H1Q9Y4A9 318 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 MYO1GB0I1T2 1018 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 SEC22BO75396 215 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 NME6O75414 186 aaPredicted RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 ZWINTO95229 277 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 ACTL6AO96019 429 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 NTSP30990 170 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 TIMP3P35625 211 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 WNT3P56703 355 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 MRPS22P82650 360 aaKnown RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 RCAN2Q14206 197 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 SH2D4BQ5SQS7 431 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 NOXRED1Q6NXP6 359 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 LARP4Q71RC2 724 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHD3-206ENST00000452447 CDH24Q86UP0 819 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 TMEM200AQ86VY9 491 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 SLC44A2Q8IWA5 706 aaPredicted RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 WDSUB1Q8N9V3 476 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 TNIP2Q8NFZ5 429 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 WDYHV1Q96HA8 205 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 TRIB1Q96RU8 372 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 C12orf65Q9H3J6 166 aaKnown RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 MYNNQ9NPC7 610 aa11.75□□□□□ -0.53
CHD3-206ENST00000452447 ZNF629Q9UEG4 869 aaPredicted RBP11.75□□□□□ -0.53
CHD3-206ENST00000452447 KIAA1549Q9HCM3 1950 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 PCNX3Q9H6A9 2034 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 A0A087WV62 115 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 TLDC2A0PJX2 215 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 TSPAN2O60636 221 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 SLITRK5O94991 958 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 UQCRC1P31930 480 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 CEACAM8P31997 349 aaPredicted RBP11.74□□□□□ -0.53
CHD3-206ENST00000452447 PEX19P40855 299 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 MC3RP41968 323 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 PNLIPRP2P54317 469 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 ZNF155Q12901 538 aaPredicted RBP11.74□□□□□ -0.53
CHD3-206ENST00000452447 CLEC6AQ6EIG7 209 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 FAM71E1Q6IPT2 247 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 ENPP6Q6UWR7 440 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 ARSKQ6UWY0 536 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 NPSR1Q6W5P4 371 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 IKBIPQ70UQ0 350 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 IFNEQ86WN2 208 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 PLCZ1Q86YW0 608 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 NAXEQ8NCW5 288 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHD3-206ENST00000452447 EFHD2Q96C19 240 aaPredicted RBP11.74□□□□□ -0.53
CHD3-206ENST00000452447 METTL2AQ96IZ6 378 aaKnown RBP11.74□□□□□ -0.53
CHD3-206ENST00000452447 DDX18Q9NVP1 670 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms