RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TSPAN2O60636 221 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 ABCB7O75027 752 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 ERN1O75460 977 aaKnown RBP11.37□□□□□ -0.59
CPSF4-208ENST00000452047 PSMG1O95456 288 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 EPPINO95925 133 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 UROSP10746 265 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 BMP7P18075 431 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 PRPH2P23942 346 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 CEACAM8P31997 349 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-208ENST00000452047 MPIP34949 423 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 DLX5P56178 289 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 WNT3P56703 355 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 PSPHP78330 225 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 C2orf80Q0P641 193 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 PCLAFQ15004 111 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 KIAA0040Q15053 153 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 SLC25A35Q3KQZ1 300 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 CFAP157Q5JU67 520 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 WIPI1Q5MNZ9 446 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-208ENST00000452047 CLEC6AQ6EIG7 209 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 NOXRED1Q6NXP6 359 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 LACC1Q8IV20 430 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 C10orf107Q8IVU9 208 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 PM20D2Q8IYS1 436 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 WDSUB1Q8N9V3 476 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 RELL2Q8NC24 303 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-208ENST00000452047 CDC26Q8NHZ8 85 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 WDYHV1Q96HA8 205 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 METTL2AQ96IZ6 378 aaKnown RBP11.37□□□□□ -0.59
CPSF4-208ENST00000452047 BBS4Q96RK4 519 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 STMN4Q9H169 189 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-208ENST00000452047 SERHLQ9NQF3 203 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 MKS1Q9NXB0 559 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 TAS2R9Q9NYW1 312 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 MAPRE3Q9UPY8 281 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 PTGDR2Q9Y5Y4 395 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 SPG11Q96JI7 2443 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 A0A087WV62 115 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 HSPB2A8KAH6 182 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 B4DXG7 233 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 CRCPO75575 148 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 REM1O75628 298 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 SLITRK5O94991 958 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 JUNP05412 331 aaKnown RBP11.36□□□□□ -0.59
CPSF4-208ENST00000452047 CAPN3P20807 821 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 TACR1P25103 407 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 TIMP3P35625 211 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 MC3RP41968 323 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 PSG6Q00889 435 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 TOMM20Q15388 145 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 HSPB2Q16082 182 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 NSUN5P2Q63ZY6 315 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 POMZP3Q6PJE2 187 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 RNF165Q6ZSG1 346 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 IKBIPQ70UQ0 350 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 WDR53Q7Z5U6 358 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-208ENST00000452047 YRDCQ86U90 279 aaKnown RBP11.36□□□□□ -0.59
CPSF4-208ENST00000452047 CLYBLQ8N0X4 340 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 CCDC63Q8NA47 563 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 TNIP2Q8NFZ5 429 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 OR4N2Q8NGD1 307 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 OR2W6PQ8NHA6 318 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 ABTB1Q969K4 478 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-208ENST00000452047 TMCO6Q96DC7 493 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 EGLN2Q96KS0 407 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 FCRL1Q96LA6 429 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 ADOQ96SZ5 270 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 OR2B2Q9GZK3 357 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 GLIPR2Q9H4G4 154 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 MIEF1Q9NQG6 463 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 SENP1Q9P0U3 644 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 KCNN3Q9UGI6 736 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 MID2Q9UJV3 735 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 CAMK2AQ9UQM7 478 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 WBP11Q9Y2W2 641 aaKnown RBP11.36□□□□□ -0.59
CPSF4-208ENST00000452047 L3MBTL1Q9Y468 752 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 WIF1Q9Y5W5 379 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 F8P00451 2351 aa11.36□□□□□ -0.59
CPSF4-208ENST00000452047 CD8B2A6NJW9 211 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 UPK1AO00322 258 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 PLOD2O00469 737 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 COQ9O75208 318 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 CBR3O75828 277 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 ACTL6AO96019 429 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 NUDT17P0C025 328 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 NCBP2P52298 156 aaKnown RBP eCLIP11.35□□□□□ -0.59
CPSF4-208ENST00000452047 PNLIPRP2P54317 469 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 GAS1P54826 345 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 VSNL1P62760 191 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 EFR3AQ14156 821 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 TMEM107Q6UX40 140 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 Q6ZSR9 355 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 LARP4Q71RC2 724 aaKnown RBP eCLIP11.35□□□□□ -0.59
CPSF4-208ENST00000452047 TRABD2AQ86V40 505 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 PLCZ1Q86YW0 608 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 SLC44A2Q8IWA5 706 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-208ENST00000452047 OR2L13Q8N349 312 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 BANPQ8N9N5 519 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 OR2T11Q8NH01 316 aa11.35□□□□□ -0.59
CPSF4-208ENST00000452047 APOPT1Q96IL0 206 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms