RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 EXTL1Q92935 676 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NSUN4Q96CB9 384 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 PRR11Q96HE9 360 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 TXN2Q99757 166 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PTGES2Q9H7Z7 377 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 EXOSC3Q9NQT5 275 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 SEMA4GQ9NTN9 838 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NLGN3Q9NZ94 848 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FKBPLQ9UIM3 349 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 BTNL2Q9UIR0 455 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MBD1Q9UIS9 605 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF223Q9UK11 482 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 CORINQ9Y5Q5 1042 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ARL5AQ9Y689 179 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ROBO1Q9Y6N7 1651 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 DLEC1Q9Y238 1755 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SLC22A31A6NKX4 558 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 H0Y8G0 127 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ARPC1BO15143 372 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 TREHO43280 583 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SRPX2O60687 465 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 MTX2O75431 263 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MED6O75586 246 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SLITRK3O94933 977 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 AK1P00568 194 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PLGP00747 810 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 GBAP04062 536 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RPLP2P05387 115 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 ATXN1LP0C7T5 689 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF286BP0CG31 522 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PCGF2P35227 344 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RFX2P48378 723 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 EPHA5P54756 1037 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TPPP2P59282 170 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR2B8PP59922 312 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 S100A10P60903 97 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LCN6P62502 163 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SLC35A2P78381 396 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 IFITM2Q01629 132 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PRKCZQ05513 592 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GALNT2Q10471 571 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FUT2Q10981 343 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MTAPQ13126 283 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 P2RY14Q15391 338 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 BATFQ16520 125 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TAF9Q16594 264 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GUCA2BQ16661 112 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 UGT8Q16880 541 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C21orf62-AS1Q17RA5 79 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RNASE12Q5GAN4 147 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 MFSD14BQ5SR56 506 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NOL9Q5SY16 702 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 IER5LQ5T953 404 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MARC1Q5VT66 337 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LIPKQ5VXJ0 399 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RNLSQ5VYX0 342 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LEMD1Q68G75 181 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PM20D1Q6GTS8 502 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TBPL2Q6SJ96 375 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FAM180AQ6UWF9 173 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ALKAL2Q6UX46 152 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 B3GNT9Q6UX72 402 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NPNTQ6UXI9 565 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 UNC5DQ6UXZ4 953 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FAM183BPQ6ZVS7 135 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GPR155Q7Z3F1 870 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FAM131BQ86XD5 332 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZFP82Q8N141 532 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PELI3Q8N2H9 469 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C2CD4AQ8NCU7 369 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 STEAP2Q8NFT2 490 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR5W2Q8NH69 310 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 POC1BQ8TC44 478 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 APH1BQ8WW43 257 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C22orf15Q8WYQ4 148 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HGDQ93099 445 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SAT2Q96F10 170 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 SIGLEC10Q96LC7 697 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C3orf30Q96M34 536 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR2A14Q96R47 310 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PINK1Q9BXM7 581 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SLIRPQ9GZT3 109 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 SLC25A31Q9H0C2 315 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF700Q9H0M5 742 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TSPAN10Q9H1Z9 355 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 MYOZ1Q9NP98 299 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 ITM2CQ9NQX7 267 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 KCMF1Q9P0J7 381 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GPR160Q9UJ42 338 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MRTO4Q9UKD2 239 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 FZD4Q9ULV1 537 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NDRG2Q9UN36 371 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 AKT3Q9Y243 479 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TMEM184BQ9Y519 407 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 PCDHA9Q9Y5H5 950 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZNF541Q9H0D2 1346 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MYH11P35749 1972 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TOPAZ1Q8N9V7 1692 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NAV1Q8NEY1 1877 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LOC102723532A0A0G2JNH3 316 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms