RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SVBPQ8N300 66 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TBC1D19Q8N5T2 526 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ARIH2OSQ8N7S6 290 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 SAMD12Q8N8I0 201 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TMIEQ8NEW7 156 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 OR14A16Q8NHC5 309 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 HUS1BQ8NHY5 278 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ASZ1Q8WWH4 475 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 RAD51AP1Q96B01 352 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TCEAL4Q96EI5 215 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 LCORQ96JN0 433 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 CHST8Q9H2A9 424 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 MTG2Q9H4K7 406 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TBC1D17Q9HA65 648 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ZNF334Q9HCZ1 680 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 PRMT8Q9NR22 394 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 NKIRAS2Q9NYR9 191 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TESQ9UGI8 421 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 TRPS1Q9UHF7 1281 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ACSL6Q9UKU0 697 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 FAM227AF5H4B4 570 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 GABRPO00591 440 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 MID1O15344 667 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 PRAF2O60831 178 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SOX30O94993 753 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 ADAP00813 363 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 MT-ND4P03905 459 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 CRYBA1P05813 215 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 URODP06132 367 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 IGFBP1P08833 259 aaPredicted RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 CD3GP09693 182 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 CBSLP0DN79 551 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SPI1P17947 270 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 HSD3B2P26439 372 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 HOXC13P31276 330 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 CBSP35520 551 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 CD96P40200 585 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 GDF5P43026 501 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 VEGFCP49767 419 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 RAP2BP61225 183 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 WDR5P61964 334 aaKnown RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 SNRPEP62304 92 aaKnown RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 TAP2Q03519 686 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SOX4Q06945 474 aaPredicted RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 BCL2L1Q07817 233 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 INSL4Q14641 139 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 RTP2Q5QGT7 225 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 ZNF660Q6AZW8 331 aaPredicted RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 ZNF770Q6IQ21 691 aaPredicted RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 SBSNQ6UWP8 590 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 PGAP1Q75T13 922 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 CMIPQ8IY22 773 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SPAG16Q8N0X2 631 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 OXR1Q8N573 874 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 GPR156Q8NFN8 814 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 OR10K1Q8NGX5 313 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SYT17Q9BSW7 474 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SLC25A32Q9H2D1 315 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 UCK1Q9HA47 277 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 MYOZ2Q9NPC6 264 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 CA10Q9NS85 328 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 C14orf105Q9NVL8 296 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 ZSCAN32Q9NX65 697 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 ELOVL2Q9NXB9 296 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 TEX10Q9NXF1 929 aaPredicted RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 NTMQ9P121 344 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 RHCGQ9UBD6 479 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 CBLCQ9ULV8 474 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 ENTPD4Q9Y227 616 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 C2orf92A0A1B0GVN3 265 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 OR6C68A6NDL8 312 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 LOC730098B7Z3J9 87 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 TAPBPO15533 448 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 FBXO24O75426 580 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 ADH1CP00326 375 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 FGF1P05230 155 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 THP07101 528 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 EBLN1P0CF75 366 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 TYRP14679 529 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 PRPS1L1P21108 318 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 MST1P26927 711 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 CDKN1CP49918 316 aaPredicted RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 XKP51811 444 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 ILKQ13418 452 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 RGNQ15493 299 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SYTL3Q4VX76 610 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SYT14P1Q58G82 188 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 RNASE12Q5GAN4 147 aaKnown RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 CTSL3PQ5NE16 218 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 MFSD14CQ5VZR4 134 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 OR5M10Q6IEU7 315 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 LRRN1Q6UXK5 716 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 BEND4Q6ZU67 534 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 IKBIPQ70UQ0 350 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 SPICQ8N5J4 248 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 RTL3Q8N8U3 475 aaKnown RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 GEMIN6Q8WXD5 167 aaKnown RBP8.13□□□□□ -1.11
LSM5-208ENST00000450169 GAL3ST1Q99999 423 aa8.13□□□□□ -1.11
LSM5-208ENST00000450169 WDR26Q9H7D7 661 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms