RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SLC26A5P58743 744 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 DCAF7P61962 342 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 RHDQ02161 417 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 ZNF155Q12901 538 aaPredicted RBP17.88■□□□□ 0.45
RPS28-202ENST00000449223 PUM1Q14671 1186 aaKnown RBP eCLIP17.88■□□□□ 0.45
RPS28-202ENST00000449223 EBPQ15125 230 aaKnown RBP17.88■□□□□ 0.45
RPS28-202ENST00000449223 ARHGAP11BQ3KRB8 267 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 CT45A2Q5DJT8 189 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 CRB2Q5IJ48 1285 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 KIRREL2Q6UWL6 708 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 EID3Q8N140 333 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 ZSCAN1Q8NBB4 408 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 NFKBIDQ8NI38 313 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 FIG4Q92562 907 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 NCLNQ969V3 563 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 DUS3LQ96G46 650 aaKnown RBP17.88■□□□□ 0.45
RPS28-202ENST00000449223 VMP1Q96GC9 406 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 TMEM19Q96HH6 336 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 IMMP1LQ96LU5 166 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 NSMCE2Q96MF7 247 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 ANGPT4Q9Y264 503 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 GPR55Q9Y2T6 319 aaPredicted RBP17.88■□□□□ 0.45
RPS28-202ENST00000449223 KCNE3Q9Y6H6 103 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 DSPPQ9NZW4 1301 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 TCRBV5S2A0A599 114 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 A8MVJ9 347 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 ENTPD5O75356 428 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 BCHEP06276 602 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 PPICP45877 212 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 CRISP3P54108 245 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 PSPHP78330 225 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 SYPL1Q16563 259 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 CYP2R1Q6VVX0 501 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 LRRC74BQ6ZQY2 392 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 PPP1R32Q7Z5V6 425 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 C9orf40Q8IXQ3 194 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 C10orf67Q8IYJ2 551 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 OR11G2Q8NGC1 345 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 FBXO30Q8TB52 745 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 CDS1Q92903 461 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 ADIPOR1Q96A54 375 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 C8orf44Q96CB5 159 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 TREX2Q9BQ50 279 aaPredicted RBP17.88■□□□□ 0.45
RPS28-202ENST00000449223 BTBD2Q9BX70 525 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 ITPAQ9BY32 194 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 DCAF13Q9NV06 445 aaKnown RBP17.88■□□□□ 0.45
RPS28-202ENST00000449223 CALML5Q9NZT1 146 aa17.88■□□□□ 0.45
RPS28-202ENST00000449223 ZNF223Q9UK11 482 aaPredicted RBP17.88■□□□□ 0.45
RPS28-202ENST00000449223 SEC24DO94855 1032 aaPredicted RBP17.87■□□□□ 0.45
RPS28-202ENST00000449223 PGM3O95394 542 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 TRHRP34981 398 aaPredicted RBP17.87■□□□□ 0.45
RPS28-202ENST00000449223 SOX11P35716 441 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 CRYBA2P53672 197 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 RPS18P62269 152 aaKnown RBP17.87■□□□□ 0.45
RPS28-202ENST00000449223 EXT1Q16394 746 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 NPSR1Q6W5P4 371 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 WDR53Q7Z5U6 358 aaPredicted RBP17.87■□□□□ 0.45
RPS28-202ENST00000449223 PATL1Q86TB9 770 aaKnown RBP17.87■□□□□ 0.45
RPS28-202ENST00000449223 SPPL2CQ8IUH8 684 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 ZNF441Q8N8Z8 693 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 BBS10Q8TAM1 723 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 NUBPLQ8TB37 319 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 PMM1Q92871 262 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 OTUB1Q96FW1 271 aaPredicted RBP17.87■□□□□ 0.45
RPS28-202ENST00000449223 LRGUKQ96M69 825 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 ZNF350Q9GZX5 532 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 SAP130Q9H0E3 1048 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 POLE3Q9NRF9 147 aa17.87■□□□□ 0.45
RPS28-202ENST00000449223 SPTBN4Q9H254 2564 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 FRG2CA6NGY1 282 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 C5orf58C9J3I9 102 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 MGRN1O60291 552 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 CHRM4P08173 479 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 NR2F1P10589 423 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 ETS2P15036 469 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 DRD5P21918 477 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 RIPK1Q13546 671 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 IRAK1BP1Q5VVH5 260 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 PLAG1Q6DJT9 500 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 NDUFAF7Q7L592 441 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 C16orf62Q7Z3J2 963 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 IL22RA1Q8N6P7 574 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 COX18Q8N8Q8 333 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 ANKFN1Q8N957 763 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 FAM110BQ8TC76 370 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 GPR151Q8TDV0 419 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 ELP5Q8TE02 316 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 ADAMTS17Q8TE56 1095 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 VPS50Q96JG6 964 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 RNF145Q96MT1 663 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 WWTR1Q9GZV5 400 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 SLC38A1Q9H2H9 487 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 RUBCNLQ9H714 662 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 Q9N2J8 555 aa17.86■□□□□ 0.45
RPS28-202ENST00000449223 GPC6Q9Y625 555 aaPredicted RBP17.86■□□□□ 0.45
RPS28-202ENST00000449223 A0A0G2JPF8 293 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 C2orf92A0A1B0GVN3 265 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 TRABD2BA6NFA1 517 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 HNRNPCL2B2RXH8 293 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 HNRNPCL3B7ZW38 293 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms