RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ERICH5Q6P6B1 374 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 NPSR1Q6W5P4 371 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 MICU2Q8IYU8 434 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 ZNF441Q8N8Z8 693 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 C17orf47Q8NEP4 570 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 NUBPLQ8TB37 319 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 CDS1Q92903 461 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 ANGPTL2Q9UKU9 493 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 KCNE3Q9Y6H6 103 aa13.03□□□□□ -0.32
SHMT2-203ENST00000449049 C2orf92A0A1B0GVN3 265 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 ELOVL7A1L3X0 281 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 PRAMEF27A3QJZ7 478 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 CFAP73A6NFT4 308 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 FRG2CA6NGY1 282 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 PRKNO60260 465 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-203ENST00000449049 CAPNS1P04632 268 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 TFPTP0C1Z6 253 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 ICAM2P13598 275 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 NQO1P15559 274 aaKnown RBP13.02□□□□□ -0.33
SHMT2-203ENST00000449049 DRD5P21918 477 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 DCAF7P61962 342 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 FUT5Q11128 374 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 MAPK11Q15759 364 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 C11orf91Q3C1V1 193 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 PTRH1Q86Y79 214 aaKnown RBP13.02□□□□□ -0.33
SHMT2-203ENST00000449049 C11orf65Q8NCR3 313 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 TNIP2Q8NFZ5 429 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 XAGE5Q8WWM1 108 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 MAL2Q969L2 176 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 NAF1Q96HR8 494 aaKnown RBP13.02□□□□□ -0.33
SHMT2-203ENST00000449049 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
SHMT2-203ENST00000449049 P2RX2Q9UBL9 471 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 SLC7A8Q9UHI5 535 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 PCDHGB3Q9Y5G1 929 aa13.02□□□□□ -0.33
SHMT2-203ENST00000449049 A8MVJ9 347 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 CELA2AP08217 269 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 TCN1P20061 433 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 GABRA3P34903 492 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 Q0VFX4 171 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 BNIP2Q12982 314 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 ZNF630Q2M218 657 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 METTL25Q8N6Q8 603 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 CHDHQ8NE62 594 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 GPR151Q8TDV0 419 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 TP53INP1Q96A56 240 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 LCORQ96JN0 433 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 RAB3IPQ96QF0 476 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 Q9N2J8 555 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 EXD2Q9NVH0 621 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 LIPT1Q9Y234 373 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 CDC14CA4D256 554 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 TMEM200CA6NKL6 621 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 ZNF891A8MT65 544 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 ZFAND5O76080 213 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 AK1P00568 194 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 TRHRP34981 398 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 PCGF2P35227 344 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 CDK6Q00534 326 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 VEZF1Q14119 521 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 ARHGAP11BQ3KRB8 267 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 ATAD3BQ5T9A4 648 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 HLA-DQA1Q5Y7H0 255 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 SLC44A2Q8IWA5 706 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 SLC30A8Q8IWU4 369 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 COX18Q8N8Q8 333 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 OR5L2Q8NGL0 311 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 SLC38A5Q8WUX1 472 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 THAP4Q8WY91 577 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 PIK3R3Q92569 461 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 CCDC124Q96CT7 223 aaKnown RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 ASB9Q96DX5 294 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 GAL3ST4Q96RP7 486 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 BTBD2Q9BX70 525 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 NXF5Q9H1B4 397 aaKnown RBP13.01□□□□□ -0.33
SHMT2-203ENST00000449049 MUC13Q9H3R2 512 aa13.01□□□□□ -0.33
SHMT2-203ENST00000449049 MASP2O00187 686 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 TO15178 435 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 KLK10O43240 276 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 SERPINA7P05543 415 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 BCHEP06276 602 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 GGT1P19440 569 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 MSX2P35548 267 aaPredicted RBP13□□□□□ -0.33
SHMT2-203ENST00000449049 PSPHP78330 225 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 POU6F2P78424 691 aaPredicted RBP13□□□□□ -0.33
SHMT2-203ENST00000449049 SCARB2Q14108 478 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 TRIM25Q14258 630 aaKnown RBP13□□□□□ -0.33
SHMT2-203ENST00000449049 SYPL1Q16563 259 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 DCAF10Q5QP82 559 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 NFKBIDQ8NI38 313 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 TMEM19Q96HH6 336 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 FER1L6-AS2Q96M78 137 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 TRNT1Q96Q11 434 aaKnown RBP13□□□□□ -0.33
SHMT2-203ENST00000449049 CCNL2Q96S94 520 aaPredicted RBP13□□□□□ -0.33
SHMT2-203ENST00000449049 DEFB126Q9BYW3 111 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 PCDHAC1Q9H158 963 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 POMPQ9Y244 141 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 ZNF451Q9Y4E5 1061 aa13□□□□□ -0.33
SHMT2-203ENST00000449049 GXYLT2A0PJZ3 443 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms