RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 IL21RQ9HBE5 538 aa8.77□□□□□ -1
SMC6-207ENST00000448223 MKKSQ9NPJ1 570 aaPredicted RBP8.77□□□□□ -1
SMC6-207ENST00000448223 KIAA1522Q9P206 1035 aaPredicted RBP8.77□□□□□ -1
SMC6-207ENST00000448223 USP36Q9P275 1121 aaKnown RBP8.77□□□□□ -1
SMC6-207ENST00000448223 TMPRSS11EQ9UL52 423 aa8.77□□□□□ -1
SMC6-207ENST00000448223 LOC102724200A0A096LPH7 203 aaPredicted RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 A0A0G2JLL6 359 aaPredicted RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 CACNB4O00305 520 aaPredicted RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 HRGP04196 525 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 HEXBP07686 556 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ARSBP15848 533 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 AXLP30530 894 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 MEOX2P50222 304 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 OR4F3Q6IEY1 312 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 MED27Q6P2C8 311 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 FAM151BQ6UXP7 276 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 PRRT2Q7Z6L0 340 aaPredicted RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 GID4Q8IVV7 300 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 TOP6BLQ8N6T0 577 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ZNF596Q8TC21 504 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 PTCHD1Q96NR3 888 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 PKMYT1Q99640 499 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 SLC35A5Q9BS91 424 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ACTRT3Q9BYD9 372 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 CIPCQ9C0C6 399 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 TOLLIPQ9H0E2 274 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ABCC13Q9NSE7 274 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 VNN3Q9NY84 501 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 GPR39O43194 453 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 NIPSNAP2O75323 286 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 CKBP12277 381 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 S100A11P31949 105 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 SPAM1P38567 509 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ZNF84P51523 738 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 COL9A2Q14055 689 aaPredicted RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 COL19A1Q14993 1142 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 PROX2Q3B8N5 592 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 TSTD2Q5T7W7 516 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 DBX2Q6ZNG2 339 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 MCEMP1Q8IX19 187 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 HS3ST5Q8IZT8 346 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 FAM185AQ8N0U4 392 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ZBTB2Q8N680 514 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 OR2AJ1Q8NGZ0 328 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 SLC16A10Q8TF71 515 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 LRFN5Q96NI6 719 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 CDC6Q99741 560 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 GAR1Q9NY12 217 aaKnown RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 LRIT2A6NDA9 550 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 CTDSP2O14595 271 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 C1QBP02746 253 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 CYP17A1P05093 508 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 CPT1AP50416 773 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 CDKN2DP55273 166 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 GRM2Q14416 872 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 EIF4HQ15056 248 aaKnown RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 PTPRRQ15256 657 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ODF4Q2M2E3 257 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 PCGF3Q3KNV8 242 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 NOL9Q5SY16 702 aaKnown RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 ZFAND1Q8TCF1 268 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 RNF141Q8WVD5 230 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 SLAMF9Q96A28 289 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 TNFRSF12AQ9NP84 129 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 EMC7Q9NPA0 242 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 RBFOX1Q9NWB1 397 aaKnown RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 GTF2IRD1Q9UHL9 959 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 COL11A2P13942 1736 aaPredicted RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 LTBP1Q14766 1721 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 TMX2-CTNND1H3BSU7 103 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 PIRO00625 290 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ZNF195O14628 629 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 MATN3O15232 486 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 SERPINA7P05543 415 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ITGA5P08648 1049 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 TYRP14679 529 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 MPIP34949 423 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 MAPK8P45983 427 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 SORDQ00796 357 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 HMGCS1Q01581 520 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ABRAXAS2Q15018 415 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 BEX5Q5H9J7 111 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 CYS1Q717R9 158 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 P4HA3Q7Z4N8 544 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 C2orf69Q8N8R5 385 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ZFP41Q8N8Y5 198 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 SIDT2Q8NBJ9 832 aaKnown RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 LINC01599Q8WXQ3 324 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 ZBED6CLQ96FA7 236 aaPredicted RBP8.77□□□□□ -1.01
SMC6-207ENST00000448223 SPACA7Q96KW9 195 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 TMEM30AQ9NV96 361 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 REV1Q9UBZ9 1251 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 RIMS3Q9UJD0 308 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 GJD2Q9UKL4 321 aa8.77□□□□□ -1.01
SMC6-207ENST00000448223 TSPAN11A1L157 253 aa8.76□□□□□ -1.01
SMC6-207ENST00000448223 BTBD17A6NE02 478 aa8.76□□□□□ -1.01
SMC6-207ENST00000448223 FZD9O00144 591 aa8.76□□□□□ -1.01
SMC6-207ENST00000448223 ZNF780AO75290 641 aaPredicted RBP8.76□□□□□ -1.01
SMC6-207ENST00000448223 SLC43A1O75387 559 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms