RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TMEM163Q8TC26 289 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 GXYLT2A0PJZ3 443 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 MEIOCA2RUB1 952 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 HMX3A6NHT5 357 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 C12orf71A8MTZ7 269 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 GPR89AB7ZAQ6 455 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 SCG5P05408 212 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 GPR89BP0CG08 455 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 GSTT2P0CG29 244 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 DEFB103AP81534 67 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 RTL10Q7L3V2 364 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 AVL9Q8NBF6 648 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 TCEAL4Q96EI5 215 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 SAMD8Q96LT4 415 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 COPZ2Q9P299 210 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 A0A1W2PRG6 482 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 LRRTM2O43300 516 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 RNGTTO60942 597 aaKnown RBP15.72■□□□□ 0.11
TCOF1-206ENST00000445265 ACVR1BP36896 505 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 MC3RP41968 323 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 ADAMTS19Q8TE59 1207 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 HYLS1Q96M11 299 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 TAPBPLQ9BX59 468 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 ELL3Q9HB65 397 aaPredicted RBP15.72■□□□□ 0.11
TCOF1-206ENST00000445265 IL23AQ9NPF7 189 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 SIPA1L1O43166 1804 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 BLOC1S5-TXNDC5H3BN57 136 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 B4GALT2O60909 372 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 ACP2P11117 423 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 LCN1P31025 176 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 ZNF782Q6ZMW2 699 aaPredicted RBP15.72■□□□□ 0.11
TCOF1-206ENST00000445265 NUP54Q7Z3B4 507 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 CEP76Q8TAP6 659 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 NEURL3Q96EH8 262 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 TBL1XR1Q9BZK7 514 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 HRASLS2Q9NWW9 162 aa15.72■□□□□ 0.11
TCOF1-206ENST00000445265 NUFIP1Q9UHK0 495 aaKnown RBP15.72■□□□□ 0.11
TCOF1-206ENST00000445265 MMP12P39900 470 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 SIM1P81133 766 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-206ENST00000445265 MAP4K2Q12851 820 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 LRIT3Q3SXY7 679 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 ANKRD34AQ69YU3 496 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 NLRP8Q86W28 1048 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 C7orf61Q8IZ16 206 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 PIAS4Q8N2W9 510 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-206ENST00000445265 C12orf76Q8N812 135 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-206ENST00000445265 MMP28Q9H239 520 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 TP63Q9H3D4 680 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-206ENST00000445265 ZNF69Q9UC07 566 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 PCDHGA4Q9Y5G9 962 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 GFRA2O00451 464 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 GPR143P51810 404 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 SNTB2Q13425 540 aaKnown RBP15.71■□□□□ 0.11
TCOF1-206ENST00000445265 GAB1Q13480 694 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 ZNF234Q14588 700 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 FAM71E1Q6IPT2 247 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 ATCAYQ86WG3 371 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 ZNF227Q86WZ6 799 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 LYSMD2Q8IV50 215 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 LINC01599Q8WXQ3 324 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 ZNF419Q96HQ0 510 aaPredicted RBP15.71■□□□□ 0.11
TCOF1-206ENST00000445265 G6PC3Q9BUM1 346 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 LTB4R2Q9NPC1 389 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 I3L521 148 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 CYP17A1P05093 508 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 PUM1Q14671 1186 aaKnown RBP eCLIP15.71■□□□□ 0.113e-7■■■□□ 18.6
TCOF1-206ENST00000445265 CCDC157Q569K6 752 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 WBP2Q969T9 261 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 TTTY10Q9BZA0 68 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 CXorf36Q9H7Y0 433 aa15.71■□□□□ 0.11
TCOF1-206ENST00000445265 RHPN2P1A8MT19 583 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 B4GALT3O60512 393 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 NPPBP16860 134 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 GNALP38405 381 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 EIF2DP41214 584 aaKnown RBP15.71■□□□□ 0.1
TCOF1-206ENST00000445265 CDK3Q00526 305 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 TEKQ02763 1124 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 RUNX3Q13761 415 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 C4orf46Q504U0 113 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 TMEM179BQ7Z7N9 219 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 NOXA1Q86UR1 476 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 PLPP6Q8IY26 295 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 MYLIPQ8WY64 445 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 KXD1Q9BQD3 176 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 ZNF559Q9BR84 538 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 CACNG6Q9BXT2 260 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 GABARAPL3Q9BY60 117 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 PCDHGB2Q9Y5G2 931 aa15.71■□□□□ 0.1
TCOF1-206ENST00000445265 HYKKA2RU49 373 aa15.7■□□□□ 0.1
TCOF1-206ENST00000445265 L7N2F9 121 aa15.7■□□□□ 0.1
TCOF1-206ENST00000445265 RAB3BP20337 219 aa15.7■□□□□ 0.1
TCOF1-206ENST00000445265 HIST1H1TP22492 207 aaPredicted RBP15.7■□□□□ 0.1
TCOF1-206ENST00000445265 CERS1P27544 350 aa15.7■□□□□ 0.1
TCOF1-206ENST00000445265 ZNF267Q14586 743 aaPredicted RBP15.7■□□□□ 0.1
TCOF1-206ENST00000445265 PHOSPHO1Q8TCT1 267 aa15.7■□□□□ 0.1
TCOF1-206ENST00000445265 COQ8BQ96D53 544 aa15.7■□□□□ 0.1
TCOF1-206ENST00000445265 OR5M11Q96RB7 305 aa15.7■□□□□ 0.1
TCOF1-206ENST00000445265 POLDIP3Q9BY77 421 aaKnown RBP15.7■□□□□ 0.1
TCOF1-206ENST00000445265 SLC17A9Q9BYT1 436 aa15.7■□□□□ 0.1
TCOF1-206ENST00000445265 SLA2Q9H6Q3 261 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms