RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 HMGN2P05204 90 aaKnown RBP13□□□□□ -0.33
SSBP3-208ENST00000444533 NME2P22392 152 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 KCNJ2P63252 427 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 DUSP8Q13202 625 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 LASP1Q14847 261 aaKnown RBP13□□□□□ -0.33
SSBP3-208ENST00000444533 NTRK2Q16620 822 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF791Q3KP31 576 aaPredicted RBP13□□□□□ -0.33
SSBP3-208ENST00000444533 TIGD2Q4W5G0 525 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 ATAD3BQ5T9A4 648 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF468Q5VIY5 522 aaPredicted RBP13□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF621Q6ZSS3 439 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 SPATA21Q7Z572 469 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 PRR22Q8IZ63 422 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 COX18Q8N8Q8 333 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 POGLUT1Q8NBL1 392 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 SIMC1Q8NDZ2 872 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 OR5AK3PQ8NH89 298 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 DNAJB8Q8NHS0 232 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 CPT1CQ8TCG5 803 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 DIO2Q92813 273 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 TMBIM1Q969X1 311 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 SPDL1Q96EA4 605 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 SCMH1Q96GD3 660 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 SLC35G5Q96KT7 338 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 COL21A1Q96P44 957 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 LMF2Q9BU23 707 aaKnown RBP13□□□□□ -0.33
SSBP3-208ENST00000444533 CXorf36Q9H7Y0 433 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 METTL7AQ9H8H3 244 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 SIRT3Q9NTG7 399 aaPredicted RBP13□□□□□ -0.33
SSBP3-208ENST00000444533 CBLCQ9ULV8 474 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 CNTRLQ7Z7A1 2325 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 IGSF10Q6WRI0 2623 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 ZFYVE26Q68DK2 2539 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 OR6C70A6NIJ9 312 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 ANGPT2O15123 496 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 PEX1O43933 1283 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 CCDC22O60826 627 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 SORBS2O94875 1100 aaKnown RBP12.99□□□□□ -0.33
SSBP3-208ENST00000444533 PSMG1O95456 288 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 NADKO95544 446 aaPredicted RBP12.99□□□□□ -0.33
SSBP3-208ENST00000444533 KRT75O95678 551 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 CT45A8P0DMV1 189 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 CT45A9P0DMV2 189 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 ATP6V1C1P21283 382 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 CNR1P21554 472 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 IL12AP29459 219 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 RFX3P48380 749 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 WNT3P56703 355 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 CORO7P57737 925 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
SSBP3-208ENST00000444533 PLGLB1Q02325 96 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 SF3A3Q12874 501 aaKnown RBP eCLIP12.99□□□□□ -0.336e-12■■■■■ 79.1
SSBP3-208ENST00000444533 RCAN2Q14206 197 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 MAPRE2Q15555 327 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 CT45A2Q5DJT8 189 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 MFSD12Q6NUT3 480 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 CDC73Q6P1J9 531 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 C6orf120Q7Z4R8 191 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 CISD2Q8N5K1 135 aaKnown RBP12.99□□□□□ -0.33
SSBP3-208ENST00000444533 OR9I1Q8NGQ6 314 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 NUDT8Q8WV74 236 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 STACQ99469 402 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 ELAC2Q9BQ52 826 aaKnown RBP12.99□□□□□ -0.33
SSBP3-208ENST00000444533 FAM173AQ9BQD7 235 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 SLC35A5Q9BS91 424 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 G6PC3Q9BUM1 346 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 HHATLQ9HCP6 504 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 DUSP22Q9NRW4 184 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 EXD2Q9NVH0 621 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 GIN1Q9NXP7 522 aa12.99□□□□□ -0.33
SSBP3-208ENST00000444533 BOKQ9UMX3 212 aaPredicted RBP12.99□□□□□ -0.33
SSBP3-208ENST00000444533 SNX4O95219 450 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 HPGDP15428 266 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 MATN1P21941 496 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 SOX18P35713 384 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 MASP1P48740 699 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 TRPC1P48995 793 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 KHKP50053 298 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 MEOX1P50221 254 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 PNLIPRP2P54317 469 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 GYS2P54840 703 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 FBXW4P57775 412 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 POU6F2P78424 691 aaPredicted RBP12.98□□□□□ -0.33
SSBP3-208ENST00000444533 PSG6Q00889 435 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 ELOAQ14241 798 aaKnown RBP12.98□□□□□ -0.33
SSBP3-208ENST00000444533 INPP5JQ15735 1006 aaPredicted RBP12.98□□□□□ -0.33
SSBP3-208ENST00000444533 COLEC12Q5KU26 742 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 BLOC1S3Q6QNY0 202 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 MDGA2Q7Z553 956 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.98□□□□□ -0.33
SSBP3-208ENST00000444533 PACS2Q86VP3 889 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 ATCAYQ86WG3 371 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 FBXW8Q8N3Y1 598 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 CPSF7Q8N684 471 aaKnown RBP12.98□□□□□ -0.33
SSBP3-208ENST00000444533 OR10G3Q8NGC4 313 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
SSBP3-208ENST00000444533 FBXO30Q8TB52 745 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 PAQR8Q8TEZ7 354 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 VPS33AQ96AX1 596 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms