RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NR4A3Q92570 626 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 TMEM45BQ96B21 275 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 MSI2Q96DH6 328 aaKnown RBP3.65□□□□□ -1.83
UBR3-206ENST00000444475 PSD2Q9BQI7 771 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 SYT11Q9BT88 431 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 G6PC3Q9BUM1 346 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 SLITRK2Q9H156 845 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 IL1RL2Q9HB29 575 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 VNN3Q9NY84 501 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 DLL3Q9NYJ7 618 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 ABT1Q9ULW3 272 aaKnown RBP3.65□□□□□ -1.83
UBR3-206ENST00000444475 ST3GAL5Q9UNP4 418 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 TSC22D4Q9Y3Q8 395 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 RIPK3Q9Y572 518 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 CEPT1Q9Y6K0 416 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 CHD4Q14839 1912 aa3.65□□□□□ -1.83
UBR3-206ENST00000444475 PTPRUQ92729 1446 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PCDH11XQ9BZA7 1347 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PCDH11YQ9BZA8 1340 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 GNG14A0A1W2PPG7 69 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CXorf49A8MYA2 514 aaPredicted RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 H3BNX3 289 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 EEF2KO00418 725 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 DEAF1O75398 565 aaPredicted RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 IL18BPO95998 194 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 HMOX2P30519 316 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MLF1P58340 268 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 LSM6P62312 80 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 RBBP4Q09028 425 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ZP4Q12836 540 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 DNASE1L3Q13609 305 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CRMP1Q14194 572 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PON3Q15166 354 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CYP1B1Q16678 543 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 LGSNQ5TDP6 509 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 HLA-DQA1Q5Y7H0 255 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 TCTN3Q6NUS6 607 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 C3P1Q6ZMU1 363 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 H2BFWTQ7Z2G1 175 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ZNF546Q86UE3 836 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ALYREFQ86V81 257 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 SLC35B2Q8TB61 432 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 NANPQ8TBE9 248 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 FBXO17Q96EF6 278 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 FAM89AQ96GI7 184 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 RNF170Q96K19 258 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 SGK494Q96LW2 274 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 C10orf90Q96M02 699 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 FUCA2Q9BTY2 467 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 SLC39A8Q9C0K1 460 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PTTG3PQ9NZH4 202 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PITPNC1Q9UKF7 332 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 NXT1Q9UKK6 140 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 A0A087X1B8 175 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 KBTBD11-OT1A0A1B0GTJ5 212 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 FBP2O00757 339 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 RFXANKO14593 260 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CYP26A1O43174 497 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 OR10H3O60404 316 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PMPCBO75439 489 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MT-CYBP00156 380 aaPredicted RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 GH2P01242 217 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MELTFP08582 738 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 NR2F6P10588 404 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CD82P27701 267 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CRYBB2P43320 205 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MAGEA2P43356 314 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ERFP50548 548 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ZXDBP98169 803 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PITPNAQ00169 270 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CFHR1Q03591 330 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MED21Q13503 144 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MTF1Q14872 753 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 EIF4HQ15056 248 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 CTU2Q2VPK5 515 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 SFT2D3Q587I9 215 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CCNJQ5T5M9 372 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 SLX4IPQ5VYV7 408 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MEPCEQ7L2J0 689 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 CLEC14AQ86T13 490 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 NOXA1Q86UR1 476 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.64□□□□□ -1.83
UBR3-206ENST00000444475 MUC20Q8N307 709 aaPredicted RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 ELMOD1Q8N336 334 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 SYT14Q8NB59 555 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 NSUN7Q8NE18 718 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 IFT81Q8WYA0 676 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 AMDHD1Q96NU7 426 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ZNF385AQ96PM9 386 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 MRI1Q9BV20 369 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 HOXD1Q9GZZ0 328 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CD320Q9NPF0 282 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 UVRAGQ9P2Y5 699 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 EIF3KQ9UBQ5 218 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 CLN8Q9UBY8 286 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ZFP69BQ9UJL9 534 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ZNF346Q9UL40 294 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 HYOU1Q9Y4L1 999 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MLH3Q9UHC1 1453 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ANKRD30BQ9BXX2 1392 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms