RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 GBP7Q8N8V2 638 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-208ENST00000443046 L3MBTL4Q8NA19 623 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 COL21A1Q96P44 957 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 CPNE1Q99829 537 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 REG4Q9BYZ8 158 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 ADAM29Q9UKF5 820 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 PLLPQ9Y342 182 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 ZNF175Q9Y473 711 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 GOLGA6L6A8MZA4 724 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 SUPT3HB4E1H0 165 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 TSPAN2O60636 221 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 ABCB7O75027 752 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 SUPT3HO75486 399 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 DPP4P27487 766 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 KCNJ5P48544 419 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 SIRPAP78324 504 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 OCRLQ01968 901 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 CPSF6Q16630 551 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMGN1-208ENST00000443046 TRMT12Q53H54 448 aaKnown RBP12.95□□□□□ -0.34
HMGN1-208ENST00000443046 C6orf163Q5TEZ5 329 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 OR5M10Q6IEU7 315 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 DNM1P46Q6ZS02 220 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 CHMP1BQ7LBR1 199 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 MYLK4Q86YV6 388 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-208ENST00000443046 TMBIM1Q969X1 311 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 DTNBP1Q96EV8 351 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 BTBD9Q96Q07 612 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 SERPINI1Q99574 410 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 NMRAL1Q9HBL8 299 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 PLSCR4Q9NRQ2 329 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 BCAP29Q9UHQ4 241 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 DKKL1Q9UK85 242 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 RNF11Q9Y3C5 154 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 PCDHA9Q9Y5H5 950 aa12.95□□□□□ -0.34
HMGN1-208ENST00000443046 EFCAB8A8MWE9 144 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 H0YC42 278 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 GRK2P25098 689 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 GP5P40197 560 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 TPD52P55327 224 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-208ENST00000443046 DSCR4P56555 118 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-208ENST00000443046 EEFSECP57772 596 aaKnown RBP12.94□□□□□ -0.34
HMGN1-208ENST00000443046 GPX6P59796 221 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 DUSP2Q05923 314 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 ADAM5Q6NVV9 412 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 STAC2Q6ZMT1 411 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 FAM214BQ7L5A3 538 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 LRRC8AQ8IWT6 810 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 ZBED8Q8IZ13 594 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 FADS6Q8N9I5 356 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 OR52R1Q8NGF1 315 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 LILRB1Q8NHL6 650 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-208ENST00000443046 RHEBL1Q8TAI7 183 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 FNDC9Q8TBE3 224 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 TRPC4APQ8TEL6 797 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 ZNF681Q96N22 645 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 BRINP2Q9C0B6 783 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 KLHL4Q9C0H6 718 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 PRODH2Q9UF12 536 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 SNX12Q9UMY4 172 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 PROCRQ9UNN8 238 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 ACOT9Q9Y305 439 aa12.94□□□□□ -0.34
HMGN1-208ENST00000443046 GOLGA6L10A6NI86 522 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 FAM159BA6NKW6 160 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 C17orf51A8MQB3 221 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 REM1O75628 298 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 KLK1P06870 262 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 LTA4HP09960 611 aaKnown RBP12.93□□□□□ -0.34
HMGN1-208ENST00000443046 CT45A8P0DMV1 189 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 CT45A9P0DMV2 189 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 CSNK2A2P19784 350 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-208ENST00000443046 IL11P20809 199 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 SSTR1P30872 391 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 FEN1P39748 380 aaKnown RBP12.93□□□□□ -0.34
HMGN1-208ENST00000443046 RPS4XP62701 263 aaKnown RBP12.93□□□□□ -0.34
HMGN1-208ENST00000443046 VEZF1Q14119 521 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 CT45A2Q5DJT8 189 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 GOLGA7Q7Z5G4 137 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 CMC1Q7Z7K0 106 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 UBQLNLQ8IYU4 475 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 ADCY4Q8NFM4 1077 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 PLPPR2Q96GM1 343 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 ADOQ96SZ5 270 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 PINK1Q9BXM7 581 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 IPPKQ9H8X2 491 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 SAYSD1Q9NPB0 183 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 LAMP3Q9UQV4 416 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 ZNF337Q9Y3M9 751 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 ANGPTL3Q9Y5C1 460 aa12.93□□□□□ -0.34
HMGN1-208ENST00000443046 TCRBV9S1A1TA0A576 114 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 C1orf226A1L170 272 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 SYCE1LA8MT33 242 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 LINC01387J3KSC0 135 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 PHF1O43189 567 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-208ENST00000443046 TP53P04637 393 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-208ENST00000443046 DANCRP0C864 163 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 PCSK2P16519 638 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 TCEA1P23193 301 aaKnown RBP12.92□□□□□ -0.34
HMGN1-208ENST00000443046 IDUAP35475 653 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 PNLIPRP2P54317 469 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 ALDH18A1P54886 795 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms