RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SOX30O94993 753 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 OR4F21O95013 312 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 CRHP06850 196 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 CELA3AP09093 270 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 RFPL3SP0C7P2 107 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 MYL2P10916 166 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 PEPDP12955 493 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 BMP7P18075 431 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 NTSP30990 170 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 SRD5A2P31213 254 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 PCYT1AP49585 367 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 ART1P52961 327 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 PPP2R2AP63151 447 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 CYP27C1Q4G0S4 372 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 FLYWCH1Q4VC44 716 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 SPDYAQ5MJ70 313 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 LETMD1Q6P1Q0 360 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 IFNEQ86WN2 208 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 CCDC116Q8IYX3 515 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 CDYL2Q8N8U2 506 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 OR4K17Q8NGC6 315 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 MBD3L2Q8NHZ7 208 aaPredicted RBP7.1□□□□□ -1.27
CD44-211ENST00000442151 RDH11Q8TC12 318 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.1□□□□□ -1.27
CD44-211ENST00000442151 CTHRC1Q96CG8 243 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 L3HYPDHQ96EM0 354 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 SLC35A4Q96G79 324 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 UCN2Q96RP3 112 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 TRIB1Q96RU8 372 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 FOXC2Q99958 501 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 SFXN3Q9BWM7 321 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 NXF5Q9H1B4 397 aaKnown RBP7.1□□□□□ -1.27
CD44-211ENST00000442151 SLC35C2Q9NQQ7 365 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 DMGDHQ9UI17 866 aaKnown RBP7.1□□□□□ -1.27
CD44-211ENST00000442151 DLGAP4Q9Y2H0 992 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 GPR55Q9Y2T6 319 aaPredicted RBP7.1□□□□□ -1.27
CD44-211ENST00000442151 L3MBTL1Q9Y468 752 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 OR10H1Q9Y4A9 318 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 A0A087WV62 115 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 H0Y3Z8 333 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 SLC28A1O00337 649 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 PLOD3O60568 738 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 RCBTB2O95199 551 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 CHEK2O96017 543 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 CLPSP04118 112 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 ANXA4P09525 319 aaPredicted RBP7.09□□□□□ -1.27
CD44-211ENST00000442151 CT62P0C5K7 136 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 TMIGD3P0DMS9 266 aaPredicted RBP7.09□□□□□ -1.27
CD44-211ENST00000442151 EPXP11678 715 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 S1PR1P21453 382 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 BMP5P22003 454 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 PTPN6P29350 595 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 ADH7P40394 386 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 DGKQP52824 942 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 C2orf80Q0P641 193 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 GALNT1Q10472 559 aaPredicted RBP7.09□□□□□ -1.27
CD44-211ENST00000442151 GANABQ14697 944 aaKnown RBP7.09□□□□□ -1.27
CD44-211ENST00000442151 GLYR1Q49A26 553 aaPredicted RBP7.09□□□□□ -1.27
CD44-211ENST00000442151 UNC50Q53HI1 259 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 GALNT18Q6P9A2 607 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 FAM111BQ6SJ93 734 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 IKBIPQ70UQ0 350 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 P4HA3Q7Z4N8 544 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 FAM83FQ8NEG4 500 aaPredicted RBP7.09□□□□□ -1.27
CD44-211ENST00000442151 CEP70Q8NHQ1 597 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 DOK4Q8TEW6 326 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 C16orf78Q8WTQ4 265 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 HGDQ93099 445 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 ITPKCQ96DU7 683 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 RMND5BQ96G75 393 aaPredicted RBP7.09□□□□□ -1.27
CD44-211ENST00000442151 WDYHV1Q96HA8 205 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 NSUN5Q96P11 429 aaKnown RBP7.09□□□□□ -1.27
CD44-211ENST00000442151 BTBD9Q96Q07 612 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 ITPAQ9BY32 194 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 UGT2B28Q9BY64 529 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 OR2B2Q9GZK3 357 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 UBQLN3Q9H347 655 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 MIEF1Q9NQG6 463 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 RASSF1Q9NS23 344 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 TAS2R10Q9NYW0 307 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 DKKL1Q9UK85 242 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 ABCG2Q9UNQ0 655 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.27
CD44-211ENST00000442151 WASHC1A8K0Z3 465 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 RIPK2O43353 540 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 CTAG2O75638 210 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 DDCP20711 480 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 ENDOUP21128 410 aaKnown RBP7.08□□□□□ -1.28
CD44-211ENST00000442151 TIA1P31483 386 aaKnown RBP eCLIP7.08□□□□□ -1.28
CD44-211ENST00000442151 EMDP50402 254 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 DSCR4P56555 118 aaPredicted RBP7.08□□□□□ -1.28
CD44-211ENST00000442151 DNAJB13P59910 316 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 RPS3AP61247 264 aaKnown RBP7.08□□□□□ -1.28
CD44-211ENST00000442151 OCRLQ01968 901 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 MGAT2Q10469 447 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 TESK1Q15569 626 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 DECR1Q16698 335 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 VPS26BQ4G0F5 336 aa7.08□□□□□ -1.28
CD44-211ENST00000442151 WIPI1Q5MNZ9 446 aaPredicted RBP7.08□□□□□ -1.28
CD44-211ENST00000442151 TMEM64Q6YI46 380 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms