RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CAMK2DQ13557 499 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 MPPE1Q53F39 396 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 XKR6Q5GH73 641 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 PGBD2Q6P3X8 592 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 TPRG1Q6ZUI0 275 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 OR4K1Q8NGD4 311 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 OR6C4Q8NGE1 309 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 PCNPQ8WW12 178 aaKnown RBP11.22□□□□□ -0.61
LTBR-203ENST00000441074 ACOT12Q8WYK0 555 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 RFT1Q96AA3 541 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 NXPE2Q96DL1 559 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 OTUB1Q96FW1 271 aaPredicted RBP11.22□□□□□ -0.61
LTBR-203ENST00000441074 LRR1Q96L50 414 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 TEFMQ96QE5 360 aaKnown RBP11.22□□□□□ -0.61
LTBR-203ENST00000441074 ARHGAP9Q9BRR9 750 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 THAP7Q9BT49 309 aaPredicted RBP11.22□□□□□ -0.61
LTBR-203ENST00000441074 WRAP53Q9BUR4 548 aaKnown RBP11.22□□□□□ -0.61
LTBR-203ENST00000441074 MTG2Q9H4K7 406 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 IGFLR1Q9H665 355 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 BRF2Q9HAW0 419 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 RDH8Q9NYR8 311 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 EXO1Q9UQ84 846 aaKnown RBP11.22□□□□□ -0.61
LTBR-203ENST00000441074 EXOSC1Q9Y3B2 195 aaKnown RBP11.22□□□□□ -0.61
LTBR-203ENST00000441074 MAP4K5Q9Y4K4 846 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 MAB21L2Q9Y586 359 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 ANAPC1Q9H1A4 1944 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 A0A1W2PRG6 482 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 CARNS1A5YM72 827 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 GFYI3L273 518 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 ZNF821O75541 412 aaPredicted RBP11.21□□□□□ -0.61
LTBR-203ENST00000441074 TP53P04637 393 aaPredicted RBP11.21□□□□□ -0.61
LTBR-203ENST00000441074 ACP2P11117 423 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 ELK1P19419 428 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 BTCP35070 178 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 DGKGP49619 791 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 CSTF1Q05048 431 aaKnown RBP11.21□□□□□ -0.61
LTBR-203ENST00000441074 UBE3AQ05086 875 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 HSD17B12Q53GQ0 312 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 RAET1GQ6H3X3 334 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 UNC5DQ6UXZ4 953 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 ASB18Q6ZVZ8 466 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 IQCF1Q8N6M8 205 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 CELF5Q8N6W0 485 aaKnown RBP11.21□□□□□ -0.61
LTBR-203ENST00000441074 ARIH2OSQ8N7S6 290 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 GPR26Q8NDV2 337 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 VN1R2Q8NFZ6 395 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 SKA2Q8WVK7 121 aaPredicted RBP11.21□□□□□ -0.61
LTBR-203ENST00000441074 FGF11Q92914 225 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 ZNF707Q96C28 371 aaPredicted RBP11.21□□□□□ -0.61
LTBR-203ENST00000441074 ASIC4Q96FT7 647 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 RNF32Q9H0A6 362 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 ABCG5Q9H222 651 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 REEP4Q9H6H4 257 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 SEMA3GQ9NS98 782 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 GULP1Q9UBP9 304 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 EXTL2Q9UBQ6 330 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 KIF25Q9UIL4 384 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 NUBP2Q9Y5Y2 271 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 CACNG2Q9Y698 323 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 PIKFYVEQ9Y2I7 2098 aa11.21□□□□□ -0.61
LTBR-203ENST00000441074 A0A1W2PPL8 197 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 FAM170BA6NMN3 283 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 H0YIV9 168 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 LANCL1O43813 399 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 ETHE1O95571 254 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 CFDP00746 253 aaPredicted RBP11.21□□□□□ -0.62
LTBR-203ENST00000441074 HLA-DPB1P04440 258 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 H1F0P07305 194 aaKnown RBP11.21□□□□□ -0.62
LTBR-203ENST00000441074 SRPRAP08240 638 aaKnown RBP11.21□□□□□ -0.62
LTBR-203ENST00000441074 CXCL3P19876 107 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 CHI3L1P36222 383 aaPredicted RBP11.21□□□□□ -0.62
LTBR-203ENST00000441074 EFNB1P98172 346 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 BTN1A1Q13410 526 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 GRIN2CQ14957 1233 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 SLC5A12Q1EHB4 618 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 LY6G5CQ5SRR4 150 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 MARCH9Q86YJ5 346 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 SRFBP1Q8NEF9 429 aaKnown RBP11.21□□□□□ -0.62
LTBR-203ENST00000441074 CEP76Q8TAP6 659 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 NEIL3Q8TAT5 605 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 ST8SIA4Q92187 359 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 ATG10Q9H0Y0 220 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 DPAGT1Q9H3H5 408 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 KCMF1Q9P0J7 381 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 ACSL6Q9UKU0 697 aa11.21□□□□□ -0.62
LTBR-203ENST00000441074 TRAV6A0A075B6T7 132 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 MEIKINA0A087WXM9 373 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 GNG14A0A1W2PPG7 69 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 hCG_1807616A0A1W2PRN6 198 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 NPIPB15A6NHN6 443 aaPredicted RBP11.2□□□□□ -0.62
LTBR-203ENST00000441074 CASC3O15234 703 aaKnown RBP11.2□□□□□ -0.62
LTBR-203ENST00000441074 GPR37L1O60883 481 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 ZNF8P17098 575 aaPredicted RBP11.2□□□□□ -0.62
LTBR-203ENST00000441074 AHCYP23526 432 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 DNASE1P24855 282 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 SSTR2P30874 369 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 TIA1P31483 386 aaKnown RBP eCLIP11.2□□□□□ -0.62
LTBR-203ENST00000441074 B4GALNT1Q00973 533 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 DOC2AQ14183 400 aa11.2□□□□□ -0.62
LTBR-203ENST00000441074 NTRK2Q16620 822 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms