RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 UBTFL6P0CB48 400 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 C8orf89P0DMQ9 161 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OTX2P32243 289 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 AVPR1BP47901 424 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 EFNA3P52797 238 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 RPS26P62854 115 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 TXNL4AP83876 142 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 RUNX2Q13950 521 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 FAM53BQ14153 422 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 VWA2Q5GFL6 755 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 REEP3Q6NUK4 255 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 NIPAL1Q6NVV3 410 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CCDC80Q76M96 950 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ZDHHC13Q8IUH4 622 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CCDC116Q8IYX3 515 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 LRRC25Q8N386 305 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MARVELD2Q8N4S9 558 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 HORMAD2Q8N7B1 307 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ZSCAN1Q8NBB4 408 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR4K14Q8NGD5 310 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR10Q1Q8NGQ4 319 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR5K1Q8NHB7 308 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 FKBP10Q96AY3 582 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MVB12AQ96EY5 273 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CNRIP1Q96F85 164 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CNBD2Q96M20 576 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SPSB2Q99619 263 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 NPLQ9BXD5 320 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 BATF3Q9NR55 127 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SCOCQ9UIL1 159 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CES1P1Q9UKY3 287 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 DAPP1Q9UN19 280 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CDC14AQ9UNH5 594 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 VSTM2BA6NLU5 285 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 G3V2T6 193 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 hCG_2039718K7EN88 272 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SLC28A2O43868 658 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 GALR3O60755 368 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 HPRP00739 348 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 BCHEP06276 602 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 FOLR3P41439 243 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MAGEA2P43356 314 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ARHGDIAP52565 204 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 GTF2A1P52655 376 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 PRKAG1P54619 331 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 RAB38P57729 211 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 DAG1Q14118 895 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 GNA13Q14344 377 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 DEFB109BQ30KR1 87 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 IFI44LQ53G44 452 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 TMEM107Q6UX40 140 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 VTCN1Q7Z7D3 282 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 STK32CQ86UX6 486 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 HIPK1Q86Z02 1210 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SLC44A2Q8IWA5 706 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR2Y1Q8NGV0 311 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 STT3BQ8TCJ2 826 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SPPL2AQ8TCT8 520 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MAGEE2Q8TD90 523 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SNRNP27Q8WVK2 155 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CSF3RQ99062 836 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 DOHHQ9BU89 302 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SLC26A1Q9H2B4 701 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR51I1Q9H343 314 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 IL1RAPQ9NPH3 570 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SMPD3Q9NY59 655 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ZNF639Q9UID6 485 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 PADI2Q9Y2J8 665 aa13.57□□□□□ -0.24
TNFRSF1A-204ENST00000440083 FAM208BQ5VWN6 2430 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 IGLV3-12A0A075B6K2 115 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 C7orf72A4D263 438 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR2W5A6NFC9 320 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 H0YIG0 161 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MASP2O00187 686 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ACOX3O15254 700 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OPN1SWP03999 348 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SEMG1P04279 462 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MATN1P21941 496 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ALDH3A2P51648 485 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 EEF1A2Q05639 463 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MYBPC3Q14896 1274 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CEBPEQ15744 281 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ZNF750Q32MQ0 723 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OTUD3Q5T2D3 398 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR2T5Q6IEZ7 315 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 KRT80Q6KB66 452 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 PPP1R32Q7Z5V6 425 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 LAPTM4BQ86VI4 370 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CA13Q8N1Q1 262 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 METTL25Q8N6Q8 603 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 NUP43Q8NFH3 380 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR9A2Q8NGT5 310 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR2T29Q8NH02 315 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR51Q1Q8NH59 317 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SUN3Q8TAQ9 357 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ADAMTS17Q8TE56 1095 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ADAMTS18Q8TE60 1221 aa13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 GEMIN6Q8WXD5 167 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-204ENST00000440083 EXTL1Q92935 676 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms