RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 GPR107Q5VW38 600 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 TYW3Q6IPR3 259 aaKnown RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 PRSS48Q7RTY5 328 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 WDR53Q7Z5U6 358 aaPredicted RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 VRK2Q86Y07 508 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 P3H2Q8IVL5 708 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 SHISA5Q8N114 240 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF540Q8NDQ6 660 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 OR52P1PQ8NH57 321 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 SLC7A13Q8TCU3 470 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 FAR1Q8WVX9 515 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 SLC9A6Q92581 669 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 HOXB13Q92826 284 aaPredicted RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 FKBP10Q96AY3 582 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF350Q9GZX5 532 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 ANKRD19PQ9H560 264 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 MTHFD2LQ9H903 347 aaPredicted RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 ADAP2Q9NPF8 381 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 DUSP22Q9NRW4 184 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 KLHL28Q9NXS3 571 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF226Q9NYT6 803 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 NDOR1Q9UHB4 597 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 CLCA2Q9UQC9 943 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 IFT52Q9Y366 437 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 WDR45Q9Y484 360 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 CHST2Q9Y4C5 530 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 PCDHGA10Q9Y5H3 936 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 SCN2AQ99250 2005 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 ABCA7Q8IZY2 2146 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 SPAG17Q6Q759 2223 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 A0A0A6YYC8 382 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF99A8MXY4 864 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 I3L1I5 382 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 BCAT2O15382 392 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 RGS10O43665 173 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MPZL2O60487 215 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 FCMRO60667 390 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 NOL3O60936 208 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 NME6O75414 186 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MED26O95402 600 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MT-ND2P03891 347 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 THBS1P07996 1170 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 RPS4Y1P22090 263 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MAP3K8P41279 467 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 GSSP48637 474 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 IDH2P48735 452 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 GFERP55789 205 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CDC42P60953 191 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 IGLV3-21P80748 117 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 EMX1Q04741 257 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 DUSP8Q13202 625 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 PODNL1Q6PEZ8 512 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CD300LDQ6UXZ3 194 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 HMGN2P46Q86SG4 172 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 PEX5LQ8IYB4 626 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CARFQ8N187 725 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MORN4Q8NDC4 146 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 SIMC1Q8NDZ2 872 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 OR6C4Q8NGE1 309 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 PMM1Q92871 262 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ZG16BQ96DA0 208 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 SDF2Q99470 211 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CCDC90BQ9GZT6 254 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 SAP130Q9H0E3 1048 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ERVMER34-1Q9H9K5 563 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CACYBPQ9HB71 228 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 FKBP14Q9NWM8 211 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 UCKL1Q9NWZ5 548 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 IMPAD1Q9NX62 359 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 PSORS1C1Q9UIG5 152 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF443Q9Y2A4 671 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CSNK1G3Q9Y6M4 447 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 FITM1A5D6W6 292 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 RHPN2P1A8MT19 583 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 H3BMQ9 156 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 STK25O00506 426 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 SDC3O75056 442 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 COQ9O75208 318 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 SOX30O94993 753 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CT62P0C5K7 136 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ACVR2AP27037 513 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MASP1P48740 699 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 AFF3P51826 1226 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 EMP3P54852 163 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 GP2P55259 537 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ALDH6A1Q02252 535 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MAP4K2Q12851 820 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 COX10Q12887 443 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 LARS2Q15031 903 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 EIPR1Q53HC9 387 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 TCTE1Q5JU00 501 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 SLX4IPQ5VYV7 408 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CWF19L1Q69YN2 538 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 CCDC103Q8IW40 242 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF595Q8IYB9 648 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF619Q8N2I2 560 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 OR4K5Q8NGD3 323 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms