RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 GABRA5P31644 462 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 CHI3L1P36222 383 aaPredicted RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 NSG1P42857 185 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 CLCNKAP51800 687 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 PTPN5P54829 565 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 RPA4Q13156 261 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 GPR33Q49SQ1 333 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 PLA1AQ53H76 456 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 SYT14P1Q58G82 188 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 C3orf38Q5JPI3 329 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 DCST1Q5T197 706 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 FAM26EQ8N5C1 309 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 OR5AK3PQ8NH89 298 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 PRR14Q9BWN1 585 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 BHLHE41Q9C0J9 482 aaPredicted RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 TBC1D17Q9HA65 648 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ZSCAN32Q9NX65 697 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 KLHL42Q9P2K6 505 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 EXO1Q9UQ84 846 aaKnown RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 ASB4Q9Y574 426 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 A8MX80 341 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 APOL3O95236 402 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 IFNA7P01567 189 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ARAFP10398 606 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 IRF1P10914 325 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ELAVL4P26378 380 aaKnown RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 GJA4P35212 333 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 EXOSC2Q13868 293 aaKnown RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 GAS6Q14393 721 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 FGFBP1Q14512 234 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ADNP2Q6IQ32 1131 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 TPRG1Q6ZUI0 275 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 VRK3Q8IV63 474 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ZFP41Q8N8Y5 198 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 OR6K2Q8NGY2 324 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 METTL2AQ96IZ6 378 aaKnown RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 ZNF582Q96NG8 517 aaPredicted RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 WRAP53Q9BUR4 548 aaKnown RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 CUEDC1Q9NWM3 386 aaPredicted RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 SLCO1C1Q9NYB5 712 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ADAM30Q9UKF2 790 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 PIAS3Q9Y6X2 628 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 F5P12259 2224 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 TRDV1A0A1B0GX56 115 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 UGDHO60701 494 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 DHFRP00374 187 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 SOD1P00441 154 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ANXA3P12429 323 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 SPAM1P38567 509 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 CCINQ13939 588 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 DOC2AQ14183 400 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 SLC5A12Q1EHB4 618 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 GARNL3Q5VVW2 1013 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 UNC5DQ6UXZ4 953 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 USP45Q70EL2 814 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 LUZP2Q86TE4 346 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 OR6C4Q8NGE1 309 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 CLDN23Q96B33 292 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 POLDIP3Q9BY77 421 aaKnown RBP8.07□□□□□ -1.12
HPS4-206ENST00000439453 PPA2Q9H2U2 334 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ISYNA1Q9NPH2 558 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 PTTG3PQ9NZH4 202 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 MARK1Q9P0L2 795 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 UBQLN2Q9UHD9 624 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 ATP6V1HQ9UI12 483 aa8.07□□□□□ -1.12
HPS4-206ENST00000439453 PIPSLA2A3N6 862 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 C7orf66A4D0T2 115 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 E7EQ34 232 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 FAAHO00519 579 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 PAHP00439 452 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 HOXD4P09016 255 aaPredicted RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 RRASP10301 218 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ZNF8P17098 575 aaPredicted RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 CORO1AP31146 461 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 CCT3P49368 545 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 GAS1P54826 345 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 SRP54P61011 504 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 CSTF1Q05048 431 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 PDGFRLQ15198 375 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 DHCR24Q15392 516 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 PGBD2Q6P3X8 592 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 CD200R1LQ6Q8B3 271 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ASB18Q6ZVZ8 466 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 GPAT4Q86UL3 456 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ADGRG3Q86Y34 549 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 TMEM25Q86YD3 366 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 MAML2Q8IZL2 1156 aaPredicted RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 LSM14AQ8ND56 463 aaKnown RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 CIDECQ96AQ7 238 aaPredicted RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 PLD4Q96BZ4 506 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 LRR1Q96L50 414 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 CLEC4MQ9H2X3 399 aaPredicted RBP8.06□□□□□ -1.12
HPS4-206ENST00000439453 GHITMQ9H3K2 345 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 REEP4Q9H6H4 257 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 SGK2Q9HBY8 427 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 C2orf42Q9NWW7 574 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 ZDHHC3Q9NYG2 299 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 TAS2R7Q9NYW3 318 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 CLEC4EQ9ULY5 219 aa8.06□□□□□ -1.12
HPS4-206ENST00000439453 CACNA1IQ9P0X4 2223 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms