RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TGFAP01135 160 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 GSTA1P08263 222 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 FCGR3AP08637 254 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 SNRPCP09234 159 aaKnown RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 OR9G9P0C7N8 305 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 NCF1P14598 390 aaPredicted RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 FOSL2P15408 326 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 GATA2P23769 480 aaPredicted RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 DNAJB1P25685 340 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 PSMA5P28066 241 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 S100A5P33763 92 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 CA8P35219 290 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 MTIF2P46199 727 aaKnown RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 CNN1P51911 297 aaKnown RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 NDST1P52848 882 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 MTTPP55157 894 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 TRA2BP62995 288 aaKnown RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 ELP6Q0PNE2 266 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 MSLNQ13421 630 aaPredicted RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 STK11Q15831 433 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 CLPPQ16740 277 aaPredicted RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 TMEM44Q2T9K0 475 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 C15orf32Q32M92 178 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 ANKRD55Q3KP44 614 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 KRT71Q3SY84 523 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 GPAT3Q53EU6 434 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 BOLA3Q53S33 107 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 HERC4Q5GLZ8 1057 aaPredicted RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 TCTEX1D4Q5JR98 221 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 CFAP157Q5JU67 520 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 SPATA46Q5T0L3 261 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 DCAF12Q5T6F0 453 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 TPGS2Q68CL5 300 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 CENPPQ6IPU0 288 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 CDC42EP5Q6NZY7 148 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 ARSKQ6UWY0 536 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 CENPQQ7L2Z9 268 aaPredicted RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 SYVN1Q86TM6 617 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 WDR49Q8IV35 697 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 ARL14Q8N4G2 192 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 TRIML2Q8N7C3 387 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 COLGALT1Q8NBJ5 622 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 BBOF1Q8ND07 529 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 PNPLA2Q96AD5 504 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 NRBF2Q96F24 287 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 CXXC4Q9H2H0 198 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 LIME1Q9H400 295 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 COQ10BQ9H8M1 238 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 LRRC40Q9H9A6 602 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 Q9HAA7 133 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 KCNMB3Q9NPA1 279 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 ABCC13Q9NSE7 274 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 CENPMQ9NSP4 180 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 NMRK1Q9NWW6 199 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 SPATA7Q9P0W8 599 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 ATP6V1HQ9UI12 483 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 DIMT1Q9UNQ2 313 aaKnown RBP3□□□□□ -1.93
LSM1P1-201ENST00000438629 PLEKHA6Q9Y2H5 1048 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 STYXL1Q9Y6J8 313 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 NSD2O96028 1365 aa3□□□□□ -1.93
LSM1P1-201ENST00000438629 A0A087WZY1 265 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 NPIPA5A0A0B4J1W7 369 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 MACROD2A1Z1Q3 448 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 CTAGE15A4D2H0 777 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 ERI2A8K979 691 aaKnown RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 FOXI3A8MTJ6 420 aaPredicted RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 E9PAM4 449 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 NPIPA5E9PKD4 350 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 MAGEB3O15480 346 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 SEMA4FO95754 770 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 AK1P00568 194 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 KRT6BP04259 564 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 KRT8P05787 483 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 HCKP08631 526 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 THRBP10828 461 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 ACP1P24666 158 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 RPA1P27694 616 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 TNFRSF4P43489 277 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 KRT6CP48668 564 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 PITPNBP48739 271 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 SLC7A2P52569 658 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 VCPP55072 806 aaKnown RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 DSCR10P59022 87 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 BEX3Q00994 111 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 EXOSC7Q15024 291 aaKnown RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 CNPY1Q3B7I2 92 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 TTC19Q6DKK2 380 aaPredicted RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 DLEU7Q6UYE1 221 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 CTAGE6Q86UF2 777 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 CCDC71Q8IV32 467 aaPredicted RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 PDCL2Q8N4E4 241 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 ZNRF1Q8ND25 227 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 CHDHQ8NE62 594 aaPredicted RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 OR56B2PQ8NGI1 322 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 OR4F5Q8NH21 305 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 RNF139Q8WU17 664 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 LRRC45Q96CN5 670 aa2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 MRPL53Q96EL3 112 aaKnown RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 CNOT6LQ96LI5 555 aaKnown RBP2.99□□□□□ -1.93
LSM1P1-201ENST00000438629 SAMD8Q96LT4 415 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms