RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 E9PAM4 449 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 H0YL77 283 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PDXKO00764 312 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 APBB3O95704 486 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 GOT2P00505 430 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 MELTFP08582 738 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 FAM200BP0CF97 657 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 GSTT2P0CG29 244 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 GSTT2BP0CG30 244 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PTPN6P29350 595 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 SAA4P35542 130 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 HTR5AP47898 357 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PDZK1IP1Q13113 114 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 CYLC2Q14093 348 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZSWIM7Q19AV6 140 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ANKRD55Q3KP44 614 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ADPRMQ3LIE5 342 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 LRIT3Q3SXY7 679 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 NHLRC3Q5JS37 347 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ACER2Q5QJU3 275 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 RNLSQ5VYX0 342 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PNCKQ6P2M8 343 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ADAMTSL5Q6ZMM2 481 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 TSEN54Q7Z6J9 526 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 FLVCR1-AS1Q8TAF5 88 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 GIPC3Q8TF64 312 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ITLN1Q8WWA0 313 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 SYAP1Q96A49 352 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 WRAP53Q9BUR4 548 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 CARD6Q9BX69 1037 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 KAT8Q9H7Z6 458 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ESM1Q9NQ30 184 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 STARD5Q9NSY2 213 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 SLC35D1Q9NTN3 355 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 CLEC5AQ9NY25 188 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 GPR83Q9NYM4 423 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 CHMP2BQ9UQN3 213 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 U3KQV3 271 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 TP53BP1Q12888 1972 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 LRIT2A6NDA9 550 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 MCF2LO15068 1137 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 CHADO15335 359 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 LANCL1O43813 399 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF354AO60765 605 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 NOL3O60936 208 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 SDC3O75056 442 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PEX11AO75192 247 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PDE5AO76074 875 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 NDUFA7O95182 113 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 IGSF6O95976 241 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ANXA4P09525 319 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 SLC35G4P0C7Q5 338 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 MDH1P40925 334 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 VCPP55072 806 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 HSD17B7P56937 341 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 HAND2P61296 217 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 TRA2BP62995 288 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 NUCB2P80303 420 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 EXOSC2Q13868 293 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 CNPY1Q3B7I2 92 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 SEL1L2Q5TEA6 688 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 FAM219BQ5XKK7 198 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 RFWD3Q6PCD5 774 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ABRAXAS1Q6UWZ7 409 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 Q6ZR54 194 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PAQR9Q6ZVX9 377 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 Q7L0L9 218 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 LPCAT2Q7L5N7 544 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PRSS48Q7RTY5 328 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 SPEM1Q8N4L4 309 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF491Q8N8L2 437 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 AGAP11Q8TF27 550 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 C19orf43Q9BQ61 176 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 FICDQ9BVA6 458 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ST6GALNAC5Q9BVH7 336 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF416Q9BWM5 594 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 RPAP3Q9H6T3 665 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 AMBNQ9NP70 447 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 FAM114A2Q9NRY5 505 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ABCC13Q9NSE7 274 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 RCOR3Q9P2K3 495 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 ATP6V1HQ9UI12 483 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 PURGQ9UJV8 347 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 FOXJ3Q9UPW0 622 aa2.85□□□□□ -1.95
TRAPPC13-204ENST00000438419 A0A087WWV3 80 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 NPIPA5A0A0B4J1W7 369 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 TTC26A0AVF1 554 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZNF840PA6NDX5 716 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 NPIPA5E9PKD4 350 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 H3BTX0 84 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 IMPA2O14732 288 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 CLDN3O15551 220 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 LRRTM2O43300 516 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 KBTBD11O94819 623 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 NUDT14O95848 222 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 CALCBP10092 127 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 TNNI3P19429 210 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 PTGFRP43088 359 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 BRCC3P46736 316 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 MFAP2P55001 183 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms