RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 GALNT15Q8N3T1 639 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 HORMAD2Q8N7B1 307 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 AMER2Q8N7J2 671 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 OR52N2Q8NGI0 321 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 OR10A6Q8NH74 314 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 SFXN5Q8TD22 340 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF675Q8TD23 568 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 PTPMT1Q8WUK0 201 aaPredicted RBP6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 FBLIM1Q8WUP2 373 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 WDR60Q8WVS4 1066 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 RIT1Q92963 219 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 GIMAP5Q96F15 307 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 C16orf58Q96GQ5 468 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 C1orf159Q96HA4 380 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 DGAT2Q96PD7 388 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 RAB3IPQ96QF0 476 aaPredicted RBP6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 ECSITQ9BQ95 431 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 PCDHAC1Q9H158 963 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 WDR54Q9H977 334 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 C3orf14Q9HBI5 128 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 ZCCHC3Q9NUD5 404 aaKnown RBP6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 C14orf105Q9NVL8 296 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 GFOD1Q9NXC2 390 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 PTGFRNQ9P2B2 879 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 PADI1Q9ULC6 663 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 C19orf53Q9UNZ5 99 aaPredicted RBP6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 POMPQ9Y244 141 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 OTOGLQ3ZCN5 2332 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 PI4KAP42356 2102 aa6.55□□□□□ -1.36
LSM3P3-201ENST00000436601 CACNA1HO95180 2353 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 LAMA1P25391 3075 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 PCM1Q15154 2024 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 A8MUA0 341 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 A8MUI8 341 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 CDRT15L2A8MXV6 281 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 FAM220BPB1ANY3 271 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 C17orf105B2RV13 164 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 IDSB3KWA1 339 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ALOX12BO75342 701 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ALX3O95076 343 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 KRT75O95678 551 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 DDAH2O95865 285 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 CBX7O95931 251 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 HMGN2P05204 90 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 UMODP07911 640 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 TNNI3P19429 210 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 HTR1EP28566 365 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 SSTR4P31391 388 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 CRATP43155 626 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 MAN2A2P49641 1150 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 EMP2P54851 167 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 EEF1A2Q05639 463 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 FUT7Q11130 342 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 TP53BP2Q13625 1128 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 TRIM25Q14258 630 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF267Q14586 743 aaPredicted RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 EXOSC7Q15024 291 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ELAVL1Q15717 326 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 MAPK11Q15759 364 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 FAAH2Q6GMR7 532 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 MFSD12Q6NUT3 480 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 TMEM205Q6UW68 189 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 LANCL3Q6ZV70 420 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 FGD2Q7Z6J4 655 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ANKRD37Q7Z713 158 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ZZZ3Q8IYH5 903 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF321PQ8N8H1 164 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF615Q8N8J6 731 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ENDOVQ8N8Q3 282 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 C7orf57Q8NEG2 295 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 NUP43Q8NFH3 380 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 OR2T12Q8NG77 320 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 OR52R1Q8NGF1 315 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 OR56A1Q8NGH5 318 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 MIPOL1Q8TD10 442 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 CT55Q8WUE5 264 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 HOXB13Q92826 284 aaPredicted RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 MOAP1Q96BY2 351 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 CCDC124Q96CT7 223 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 OTUB1Q96FW1 271 aaPredicted RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 KCTD14Q9BQ13 255 aaPredicted RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 PELOQ9BRX2 385 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 YIPF4Q9BSR8 244 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 CRB3Q9BUF7 120 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 DENND2DQ9H6A0 471 aaPredicted RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 ASCL3Q9NQ33 180 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 PNO1Q9NRX1 252 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 DDX18Q9NVP1 670 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 C3orf18Q9UK00 162 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 NXT1Q9UKK6 140 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 CORO2BQ9UQ03 480 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 AP3M1Q9Y2T2 418 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 RRP15Q9Y3B9 282 aaKnown RBP6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 KCNE3Q9Y6H6 103 aa6.54□□□□□ -1.36
LSM3P3-201ENST00000436601 LOC102723996A0A087X1L8 192 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 IGHV3-20A0A0C4DH32 117 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 C9J4A7 227 aa6.53□□□□□ -1.36
LSM3P3-201ENST00000436601 HMGN4O00479 90 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms