RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 F8A1P23610 371 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 KDELR2P33947 212 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 GABRA3P34903 492 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 CLCN2P51788 898 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 CRISP3P54108 245 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 SLC26A5P58743 744 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 ARHGAP11BQ3KRB8 267 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 CCDC80Q76M96 950 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 C16orf62Q7Z3J2 963 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 SPATA24Q86W54 205 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 C10orf67Q8IYJ2 551 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 COX18Q8N8Q8 333 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 APCDD1LQ8NCL9 501 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 VMP1Q96GC9 406 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 SOCS6O14544 535 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 AK1P00568 194 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 COX6A1P12074 109 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 PCBP3P57721 371 aaKnown RBP21.35■■□□□ 1.01
CPSF4-204ENST00000436336 PUM1Q14671 1186 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■□□□□ 8.1
CPSF4-204ENST00000436336 GPAT3Q53EU6 434 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 PRAMEF8Q5VWM4 474 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 PRAMEF7Q5VXH5 474 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 SLC29A4Q7RTT9 530 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 ANKFN1Q8N957 763 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 CHDHQ8NE62 594 aaPredicted RBP21.35■■□□□ 1.01
CPSF4-204ENST00000436336 BTBD9Q96Q07 612 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 TRNT1Q96Q11 434 aaKnown RBP21.35■■□□□ 1.01
CPSF4-204ENST00000436336 CALML5Q9NZT1 146 aa21.35■■□□□ 1.01
CPSF4-204ENST00000436336 AHCTF1Q8WYP5 2266 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 TCRBV3S1A0A5B6 114 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 TRABD2BA6NFA1 517 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 PGM3O95394 542 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 CT45A8P0DMV1 189 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 CT45A9P0DMV2 189 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 PPICP45877 212 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 ERFP50548 548 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 DCAF7P61962 342 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 POU6F2P78424 691 aaPredicted RBP21.34■■□□□ 1.01
CPSF4-204ENST00000436336 RHDQ02161 417 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 EBPQ15125 230 aaKnown RBP21.34■■□□□ 1.01
CPSF4-204ENST00000436336 CT45A2Q5DJT8 189 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 KIRREL2Q6UWL6 708 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 PPP1R32Q7Z5V6 425 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 C9orf40Q8IXQ3 194 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 GOLM1Q8NBJ4 401 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 PIK3R3Q92569 461 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 BTBD2Q9BX70 525 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 BCL2L10Q9HD36 194 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 Q9N2J8 555 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 KLK13Q9UKR3 277 aa21.34■■□□□ 1.01
CPSF4-204ENST00000436336 GPR55Q9Y2T6 319 aaPredicted RBP21.34■■□□□ 1.01
CPSF4-204ENST00000436336 C2orf92A0A1B0GVN3 265 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 TCRBV5S2A0A599 114 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 GCM2O75603 506 aaPredicted RBP21.33■■□□□ 1.01
CPSF4-204ENST00000436336 C8BP07358 591 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 AQP1P29972 269 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 OTX2P32243 289 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 LRRC23Q53EV4 343 aaPredicted RBP21.33■■□□□ 1.01
CPSF4-204ENST00000436336 CRB2Q5IJ48 1285 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 NPSR1Q6W5P4 371 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 LRRC74BQ6ZQY2 392 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 PATL1Q86TB9 770 aaKnown RBP21.33■■□□□ 1.01
CPSF4-204ENST00000436336 OR11G2Q8NGC1 345 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 BBS10Q8TAM1 723 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 SLC26A7Q8TE54 656 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 POP5Q969H6 163 aaKnown RBP21.33■■□□□ 1.01
CPSF4-204ENST00000436336 KIAA1143Q96AT1 154 aaPredicted RBP21.33■■□□□ 1.01
CPSF4-204ENST00000436336 VPS50Q96JG6 964 aa21.33■■□□□ 1.01
CPSF4-204ENST00000436336 TREX2Q9BQ50 279 aaPredicted RBP21.33■■□□□ 1.01
CPSF4-204ENST00000436336 DCAF13Q9NV06 445 aaKnown RBP21.33■■□□□ 1.01
CPSF4-204ENST00000436336 ZNF223Q9UK11 482 aaPredicted RBP21.33■■□□□ 1.01
CPSF4-204ENST00000436336 A0A0G2JPF8 293 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 HNRNPCL2B2RXH8 293 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 HNRNPCL3B7ZW38 293 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 PDE9AO76083 593 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 SERPINA1P01009 418 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 CHRM4P08173 479 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 HNRNPCL4P0DMR1 293 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 TRHRP34981 398 aaPredicted RBP21.32■■□□□ 1
CPSF4-204ENST00000436336 HPCAP84074 193 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 RPS26P11Q5JNZ5 115 aaPredicted RBP21.32■■□□□ 1
CPSF4-204ENST00000436336 DCST2Q5T1A1 773 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 HLA-DQA1Q5Y7H0 255 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 HSDL2Q6YN16 418 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 NDUFAF7Q7L592 441 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 EID3Q8N140 333 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 STMN2Q93045 179 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 ADIPOR1Q96A54 375 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 RSRC1Q96IZ7 334 aaKnown RBP21.32■■□□□ 1
CPSF4-204ENST00000436336 IMMP1LQ96LU5 166 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 SDF2Q99470 211 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 RUBCNLQ9H714 662 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 OLAHQ9NV23 265 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 H6PDO95479 791 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 UMPSP11172 480 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 DRD5P21918 477 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 RNF4P78317 190 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 ELOAQ14241 798 aaKnown RBP21.32■■□□□ 1
CPSF4-204ENST00000436336 EXT1Q16394 746 aa21.32■■□□□ 1
CPSF4-204ENST00000436336 C17orf47Q8NEP4 570 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms