RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PPM1BO75688 479 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 KCNH1O95259 989 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 ANP32DO95626 131 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 IL6P05231 212 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 PGRP06401 933 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 IFI6P09912 130 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 ALOX5P09917 674 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 ZNF24P17028 368 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 GABRA3P34903 492 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 CHI3L1P36222 383 aaPredicted RBP14.29□□□□□ -0.12
TREX1-201ENST00000433541 POLR2JP52435 117 aaKnown RBP14.29□□□□□ -0.12
TREX1-201ENST00000433541 KCNK10P57789 538 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 HBA1P69905 142 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 PSPHP78330 225 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 LASP1Q14847 261 aaKnown RBP14.29□□□□□ -0.12
TREX1-201ENST00000433541 NTRK2Q16620 822 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 DECR1Q16698 335 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 PAOXQ6QHF9 649 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 ZNF227Q86WZ6 799 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 CDRT4Q8N9R6 151 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 FAR1Q8WVX9 515 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 MOAP1Q96BY2 351 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 EFHD2Q96C19 240 aaPredicted RBP14.29□□□□□ -0.12
TREX1-201ENST00000433541 OTUB1Q96FW1 271 aaPredicted RBP14.29□□□□□ -0.12
TREX1-201ENST00000433541 COL21A1Q96P44 957 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 PANX1Q96RD7 426 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 FAM173AQ9BQD7 235 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 DOHHQ9BU89 302 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 TMEM120AQ9BXJ8 343 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 TSPAN10Q9H1Z9 355 aaPredicted RBP14.29□□□□□ -0.12
TREX1-201ENST00000433541 SDR39U1Q9NRG7 319 aaPredicted RBP14.29□□□□□ -0.12
TREX1-201ENST00000433541 KLRF1Q9NZS2 232 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 CNIH4Q9P003 139 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 CBLCQ9ULV8 474 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 NTNG1Q9Y2I2 539 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 ZGRF1Q86YA3 2104 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 NBASA2RRP1 2371 aa14.29□□□□□ -0.12
TREX1-201ENST00000433541 TTC36A6NLP5 189 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 J3QKU1 62 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 ACOT7O00154 380 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 KRT16P08779 473 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 CT45A8P0DMV1 189 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 CT45A9P0DMV2 189 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 PLA2G2AP14555 144 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 CNR1P21554 472 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 IL12AP29459 219 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 PIGAP37287 484 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 MASP1P48740 699 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 DNASE1L1P49184 302 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 ARFIP2P53365 341 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 PSMD4P55036 377 aaKnown RBP14.28□□□□□ -0.12
TREX1-201ENST00000433541 MRPS22P82650 360 aaKnown RBP14.28□□□□□ -0.12
TREX1-201ENST00000433541 TIGD2Q4W5G0 525 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 CT45A2Q5DJT8 189 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 MFSD12Q6NUT3 480 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 LYPD8Q6UX82 237 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 NPSR1Q6W5P4 371 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 DNAJC14Q6Y2X3 702 aaPredicted RBP14.28□□□□□ -0.12
TREX1-201ENST00000433541 FBXW8Q8N3Y1 598 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 TRIML2Q8N7C3 387 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 COX18Q8N8Q8 333 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 OR2M7Q8NG81 312 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 OR4N2Q8NGD1 307 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 OR9I1Q8NGQ6 314 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 DNAJB8Q8NHS0 232 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 SFXN5Q8TD22 340 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 TMCO6Q96DC7 493 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 RMND5BQ96G75 393 aaPredicted RBP14.28□□□□□ -0.12
TREX1-201ENST00000433541 TAAR6Q96RI8 345 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 ADOQ96SZ5 270 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 RMND5AQ9H871 391 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 SIRT3Q9NTG7 399 aaPredicted RBP14.28□□□□□ -0.12
TREX1-201ENST00000433541 CCDC167Q9P0B6 97 aa14.28□□□□□ -0.12
TREX1-201ENST00000433541 BOKQ9UMX3 212 aaPredicted RBP14.28□□□□□ -0.12
TREX1-201ENST00000433541 A0A0G2JMM0 328 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 A0A1W2PPB8 328 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 A0A1W2PRS3 328 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 FAM234BA2RU67 622 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 FAM166BA8MTA8 275 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 KIR3DP1A8MWS1 328 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 NPIPA5E9PKD4 350 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 NR5A2O00482 541 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 TO15178 435 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 CDC40O60508 579 aaKnown RBP eCLIP14.27□□□□□ -0.13
TREX1-201ENST00000433541 ABCB7O75027 752 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 PSMG1O95456 288 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 HMGN2P05204 90 aaKnown RBP14.27□□□□□ -0.13
TREX1-201ENST00000433541 NAGAP17050 411 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 WNT3P56703 355 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 PSG6Q00889 435 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 LRRC74AQ0VAA2 488 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 EFR3AQ14156 821 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 SQLEQ14534 574 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 AGKQ53H12 422 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 C6orf10Q5SRN2 563 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 ZNF621Q6ZSS3 439 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 NUP54Q7Z3B4 507 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 CLEC4FQ8N1N0 589 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 POGLUT1Q8NBL1 392 aa14.27□□□□□ -0.13
TREX1-201ENST00000433541 ADAMTS15Q8TE58 950 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms