RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CHDHQ8NE62 594 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 GPR156Q8NFN8 814 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 OR4K5Q8NGD3 323 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ELSPBP1Q96BH3 223 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 MAP6Q96JE9 813 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TSSK3Q96PN8 268 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 DSN1Q9H410 356 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 C19orf53Q9UNZ5 99 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF407Q9C0G0 2248 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SULT1C2O00338 296 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 FBP2O00757 339 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 GALR3O60755 368 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 NIPSNAP2O75323 286 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 NDUFB2O95178 105 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ASGR2P07307 311 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CPN1P15169 458 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CD1EP15812 388 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CHRNA4P43681 627 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 PCBP3P57721 371 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 RAB2AP61019 212 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 EEF1A1P68104 462 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 EEF1A2Q05639 463 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 MAD2L1BPQ15013 274 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 LLGL1Q15334 1064 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 NRN1LQ496H8 165 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 EEF1A1P5Q5VTE0 462 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 COMMD1Q8N668 190 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SIDT2Q8NBJ9 832 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 LPPQ93052 612 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF354BQ96LW1 612 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ZIC5Q96T25 663 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 FAM129BQ96TA1 746 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 MTERF1Q99551 399 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 S100A13Q99584 98 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 USB1Q9BQ65 265 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CRISPLD2Q9H0B8 497 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SPACA1Q9HBV2 294 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CMTM6Q9NX76 183 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SLC17A4Q9Y2C5 497 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 STON1Q9Y6Q2 735 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 PTGES3LE9PB15 166 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 M0R233 179 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 DUX1O43812 170 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 LEFTY1O75610 366 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CSPG5O95196 566 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 RENP00797 406 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ATP1B1P05026 303 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SERPINA5P05154 406 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 FCGR2AP12318 317 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 IL7RP16871 459 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 NRLP54845 237 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CDH12P55289 794 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 HMGN3Q15651 99 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 EML3Q32P44 896 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TCEAL5Q5H9L2 206 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ENPP6Q6UWR7 440 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 NAGSQ8N159 534 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 POGLUT1Q8NBL1 392 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 GAB3Q8WWW8 586 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 DIRAS2Q96HU8 199 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM43Q9BTV4 400 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TEX101Q9BY14 249 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 OR52A5Q9H2C5 316 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 OR6C76A6NM76 312 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ANXA2P2A6NMY6 339 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 C9J4A7 227 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 PCDH8O95206 1070 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 EPHX1P07099 455 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ANXA2P07355 339 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 UGT1A6P19224 532 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SOX11P35716 441 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 FASLGP48023 281 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CRYZQ08257 329 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM115Q12893 351 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TUSC1Q2TAM9 212 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 AMIGO2Q86SJ2 522 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM163Q8TC26 289 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SCARF2Q96GP6 870 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ZPBPQ9BS86 351 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 UGT1A10Q9HAW8 530 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 NMUR1Q9HB89 426 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 RASSF1Q9NS23 344 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CLCA2Q9UQC9 943 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 H3BMQ9 156 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 FLRT2O43155 660 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CDK1P06493 297 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 NID1P14543 1247 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 S1PR1P21453 382 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 MLLT1Q03111 559 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 MAB21L1Q13394 359 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ENPP2Q13822 863 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF528Q3MIS6 628 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CEACAM20Q6UY09 585 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 DLEU7Q6UYE1 221 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TECPR1Q7Z6L1 1165 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 LRRTM3Q86VH5 581 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 HUS1BQ8NHY5 278 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 S100A16Q96FQ6 103 aaKnown RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SGCZQ96LD1 299 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 RIOK2Q9BVS4 552 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms