RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ARMC6Q6NXE6 501 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 C1orf94Q6P1W5 598 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 PGBD2Q6P3X8 592 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 ZCCHC12Q6PEW1 402 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 PODNL1Q6PEZ8 512 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 RNF44Q7L0R7 432 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 AVL9Q8NBF6 648 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 SLC7A13Q8TCU3 470 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 GIMAP5Q96F15 307 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 KLHDC7BQ96G42 594 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 FCRL4Q96PJ5 515 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 CDCA4Q9BXL8 241 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 PCED1AQ9H1Q7 454 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 SLC38A1Q9H2H9 487 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 TBC1D23Q9NUY8 699 aa12.02□□□□□ -0.49
DDX56-204ENST00000431640 H3BN98 237 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 M0R3H8 397 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 SEMA7AO75326 666 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 INHBBP09529 407 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 CPMP14384 443 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 CD36P16671 472 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 C21orf59P57076 290 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TUBA1BP68363 451 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ST3GAL3Q11203 375 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ST3GAL4Q11206 333 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 EIF2B5Q13144 721 aaKnown RBP12.01□□□□□ -0.49
DDX56-204ENST00000431640 AQP6Q13520 282 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 C11orf91Q3C1V1 193 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 INAVAQ3KP66 663 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 PLK5Q496M5 336 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 MEDAGQ5VYS4 303 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 C12orf73Q69YU5 71 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 MFSD12Q6NUT3 480 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 SLC36A4Q6YBV0 504 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TUBA1AQ71U36 451 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ARHGAP22Q7Z5H3 698 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 LACC1Q8IV20 430 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 OR2L13Q8N349 312 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ZBTB44Q8NCP5 570 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TOR1AIP2Q8NFQ8 470 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 OR6T1Q8NGN1 323 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 OR8J1Q8NGP2 316 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ZCCHC10Q8TBK6 192 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 KLHL6Q8WZ60 621 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 DNASE2BQ8WZ79 361 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 KAT2AQ92830 837 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TANKQ92844 425 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 PMM1Q92871 262 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 COL26A1Q96A83 441 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 SLC35A4Q96G79 324 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 VMP1Q96GC9 406 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ARHGDIGQ99819 225 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TCEAL2Q9H3H9 227 aaPredicted RBP12.01□□□□□ -0.49
DDX56-204ENST00000431640 TMEM74BQ9NUR3 256 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TMEM131Q92545 1883 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 A0A087WV62 115 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 LOC105369274A0A096LPK9 316 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 LOC102723532A0A0G2JNH3 316 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TMX2-CTNND1H3BSU7 103 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 P2RX6O15547 441 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 LCKP06239 509 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 C21orf33P30042 268 aaPredicted RBP12.01□□□□□ -0.49
DDX56-204ENST00000431640 UGT2B10P36537 528 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 CHRNEQ04844 493 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 FOXD4Q12950 439 aaPredicted RBP12.01□□□□□ -0.49
DDX56-204ENST00000431640 FZD2Q14332 565 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 IRF3Q14653 427 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TRAM2Q15035 370 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 NCF4Q15080 339 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 OCLNQ16625 522 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TIGD6Q17RP2 521 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ARHGAP11BQ3KRB8 267 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ENTPD8Q5MY95 495 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TMEM201Q5SNT2 666 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 C6orf132Q5T0Z8 1188 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 TMEM236Q5W0B7 351 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 KLHL35Q6PF15 583 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 PEX5LQ8IYB4 626 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 OR4N4Q8N0Y3 316 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 B3GNT7Q8NFL0 401 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 OR4K5Q8NGD3 323 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 OR52P1PQ8NH57 321 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ZNF675Q8TD23 568 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 GNPDA2Q8TDQ7 276 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 SLC37A2Q8TED4 501 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 S100ZQ8WXG8 99 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 LGALS12Q96DT0 336 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 RACGAP1Q9H0H5 632 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 MIR1-1HGQ9H1L0 117 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 ANKHQ9HCJ1 492 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 AMBNQ9NP70 447 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 EQTNQ9NQ60 294 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 GPR83Q9NYM4 423 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 C19orf53Q9UNZ5 99 aaPredicted RBP12.01□□□□□ -0.49
DDX56-204ENST00000431640 RPL36Q9Y3U8 105 aaKnown RBP12.01□□□□□ -0.49
DDX56-204ENST00000431640 KCNE3Q9Y6H6 103 aa12.01□□□□□ -0.49
DDX56-204ENST00000431640 SNRNP200O75643 2136 aaKnown RBP12□□□□□ -0.49
DDX56-204ENST00000431640 A0A1B0GVG6 124 aa12□□□□□ -0.49
DDX56-204ENST00000431640 OR5K3A6NET4 321 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms