RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 WDR81Q562E7 1941 aa3.69□□□□□ -1.82
HMGB3-203ENST00000430118 DOCK8Q8NF50 2099 aa3.69□□□□□ -1.82
HMGB3-203ENST00000430118 DSPP15924 2871 aaKnown RBP3.69□□□□□ -1.82
HMGB3-203ENST00000430118 IGHV4OR15-8A0A075B7B6 117 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 A0A0D9SFI3 127 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 LOC101059948A0A1B0GTJ6 334 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 A0A1B0GVG6 124 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 SPAARA0A1B0GVQ0 90 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 RGSL1A5PLK6 1076 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 ANKDD1BA6NHY2 528 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 HNRNPCL2B2RXH8 293 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 H0YIG0 161 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 SLC28A1O00337 649 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CDX4O14627 284 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CTSVO60911 334 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 GRAP2O75791 330 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CCNE2O96020 404 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 MT-ATP6P00846 226 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CRYABP02511 175 aaKnown RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 S100A6P06703 90 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 YES1P07947 543 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CLTAP09496 248 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 IGHV4-31P0DP07 118 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CYP3A5P20815 502 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 ATP6V1C1P21283 382 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 FCARP24071 287 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CETN2P41208 172 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 ACAA2P42765 397 aaKnown RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 DHPSP49366 369 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 TKTL1P51854 596 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 NAPAP54920 295 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 B2MP61769 119 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 IRX4P78413 519 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 HPCAP84074 193 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 LGALS3BPQ08380 585 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 FCHO2Q0JRZ9 810 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 TAF10Q12962 218 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 ITGB3BPQ13352 177 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 TFDP1Q14186 410 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 MAPRE2Q15555 327 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 UBE2SQ16763 222 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 FASTKD1Q53R41 847 aaKnown RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 XKR3Q5GH77 459 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 ARMCX4Q5H9R4 360 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 FAM78AQ5JUQ0 283 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 IRAK1BP1Q5VVH5 260 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CREB3L2Q70SY1 520 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 TAF8Q7Z7C8 310 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 SYVN1Q86TM6 617 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 PELI3Q8N2H9 469 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 SLC24A4Q8NFF2 622 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 OR52E1Q8NGJ3 308 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 BRSK1Q8TDC3 778 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 NTN5Q8WTR8 489 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CCDC12Q8WUD4 166 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 TMED6Q8WW62 240 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 ULK4Q96C45 1275 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 NXPE2Q96DL1 559 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 RTP4Q96DX8 246 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 SAMD8Q96LT4 415 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 OLFM3Q96PB7 478 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 SPAG8Q99932 426 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 LRRC2Q9BYS8 371 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 PITPNM3Q9BZ71 974 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 PLA2G2FQ9BZM2 168 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 WWTR1Q9GZV5 400 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 CSTL1Q9H114 145 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 TPK1Q9H3S4 243 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 LIN28AQ9H9Z2 209 aaKnown RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 GPN1Q9HCN4 374 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 KCNMB3Q9NPA1 279 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 SDR39U1Q9NRG7 319 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 FAM207AQ9NSI2 230 aaPredicted RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 PIGVQ9NUD9 493 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 FAIMQ9NVQ4 179 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 EURLQ9NYK6 297 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 FLRT3Q9NZU0 649 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 ATPIF1Q9UII2 106 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 KCNS2Q9ULS6 477 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 RPL26L1Q9UNX3 145 aaKnown RBP3.68□□□□□ -1.82
HMGB3-203ENST00000430118 L3MBTL1Q9Y468 752 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 LRRC42Q9Y546 428 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 AP1M2Q9Y6Q5 423 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 DMXL2Q8TDJ6 3036 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 TICRRQ7Z2Z1 1910 aa3.68□□□□□ -1.82
HMGB3-203ENST00000430118 COL4A2P08572 1712 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CNOT1A5YKK6 2376 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 A0A0J9YVX5 310 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 TLR4O00206 839 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 HAT1O14929 419 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 NVLO15381 856 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 EXTL3O43909 919 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 CSDE1O75534 798 aaKnown RBP3.67□□□□□ -1.82
HMGB3-203ENST00000430118 SERPINB7O75635 380 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 YEATS4O95619 227 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 GAS8O95995 478 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 KRT14P02533 472 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 PRB1P04280 392 aa3.67□□□□□ -1.82
HMGB3-203ENST00000430118 PAEPP09466 180 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms