RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PRAMEF20Q5VT98 475 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 FAM111BQ6SJ93 734 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 OPN5Q6U736 354 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 BNC2Q6ZN30 1099 aaPredicted RBP15.58■□□□□ 0.08
UBE3D-204ENST00000430071 RNF111Q6ZNA4 994 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 LURAP1LQ8IV03 231 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 CCDC116Q8IYX3 515 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 LRRC25Q8N386 305 aaPredicted RBP15.58■□□□□ 0.08
UBE3D-204ENST00000430071 C7orf57Q8NEG2 295 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 OR10G3Q8NGC4 313 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 STON2Q8WXE9 905 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 TEX37Q96LM6 180 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 DOCK7Q96N67 2140 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 BRINP2Q9C0B6 783 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 ZDHHC11Q9H8X9 412 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 SH3BP4Q9P0V3 963 aa15.58■□□□□ 0.08
UBE3D-204ENST00000430071 PRRG2O14669 202 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 UBDO15205 165 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 TROVE2P10155 538 aaKnown RBP eCLIP15.57■□□□□ 0.08
UBE3D-204ENST00000430071 LAMP1P11279 417 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 GALNSP34059 522 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 UFM1P61960 85 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 MGAT2Q10469 447 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 DUSP8Q13202 625 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF630Q2M218 657 aaPredicted RBP15.57■□□□□ 0.08
UBE3D-204ENST00000430071 BICRALQ6AI39 1079 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 RPTNQ6XPR3 784 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 R3HCC1LQ7Z5L2 792 aaKnown RBP15.57■□□□□ 0.08
UBE3D-204ENST00000430071 SAMD14Q8IZD0 417 aaPredicted RBP15.57■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF615Q8N8J6 731 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF441Q8N8Z8 693 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 GOLM1Q8NBJ4 401 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 ADCY4Q8NFM4 1077 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 OR5M3Q8NGP4 307 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 CIDECQ96AQ7 238 aaPredicted RBP15.57■□□□□ 0.08
UBE3D-204ENST00000430071 SPACA9Q96E40 222 aaPredicted RBP15.57■□□□□ 0.08
UBE3D-204ENST00000430071 CHMP6Q96FZ7 201 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 BBS4Q96RK4 519 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 FAM173AQ9BQD7 235 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 SIKE1Q9BRV8 207 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 DPY30Q9C005 99 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 SACM1LQ9NTJ5 587 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 GIMAP4Q9NUV9 329 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 DTX4Q9Y2E6 619 aa15.57■□□□□ 0.08
UBE3D-204ENST00000430071 NPIPA2E9PIF3 369 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 E9PLN8 166 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 NPIPA3F8WFD2 350 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 P04436 131 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 IDO1P14902 403 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 NT5EP21589 574 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 IL12AP29459 219 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 KIR3DL1P43629 444 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 GNGT1P63211 74 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 FUT7Q11130 342 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 PRICKLE4Q2TBC4 344 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 SLC22A10Q63ZE4 541 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 DESI1Q6ICB0 168 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 MTFR2Q6P444 385 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 XKRXQ6PP77 449 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 GALNT12Q8IXK2 581 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 PRR22Q8IZ63 422 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 FAM13CQ8NE31 585 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 OR5M9Q8NGP3 310 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 OR9A2Q8NGT5 310 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 ADIPOR1Q96A54 375 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 COQ8BQ96D53 544 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 ART5Q96L15 291 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 SGCZQ96LD1 299 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 AMDHD1Q96NU7 426 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 VKORC1Q9BQB6 163 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 TMEM120AQ9BXJ8 343 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 GLIPR2Q9H4G4 154 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 MAT2BQ9NZL9 334 aa15.56■□□□□ 0.08
UBE3D-204ENST00000430071 KLF2Q9Y5W3 355 aaPredicted RBP15.56■□□□□ 0.08
UBE3D-204ENST00000430071 CHCHD2Q9Y6H1 151 aaPredicted RBP15.56■□□□□ 0.08
UBE3D-204ENST00000430071 C9JVG2 144 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 PDPK1O15530 556 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 HNRNPRO43390 633 aaKnown RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 NME6O75414 186 aaPredicted RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 FBXO45P0C2W1 286 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 EFNA1P20827 205 aaPredicted RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 NTSP30990 170 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 MPIP34949 423 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 RPL3P39023 403 aaKnown RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 FRKP42685 505 aaPredicted RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 NCBP2P52298 156 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 MAP4K2Q12851 820 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 EXOSC7Q15024 291 aaKnown RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 GSTA3Q16772 222 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 PDCD4Q53EL6 469 aaKnown RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF628Q5EBL2 1059 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 CPTPQ5TA50 214 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 GK5Q6ZS86 529 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 SLC29A4Q7RTT9 530 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 ZNF551Q7Z340 670 aaPredicted RBP15.55■□□□□ 0.08
UBE3D-204ENST00000430071 CAMKMTQ7Z624 323 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 MED12LQ86YW9 2145 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 FAM9CQ8IZT9 166 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 SLC34A3Q8N130 599 aa15.55■□□□□ 0.08
UBE3D-204ENST00000430071 SLC22A8Q8TCC7 542 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms