RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	SLC25A35	Q3KQZ1	300 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	ACSF3	Q4G176	576 aa	Predicted RBP	16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	EIPR1	Q53HC9	387 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	CT45A2	Q5DJT8	189 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	ARSK	Q6UWY0	536 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	OR1J4	Q8NGS1	313 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	RDH11	Q8TC12	318 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	RNF138	Q8WVD3	245 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	UBLCP1	Q8WVY7	318 aa	Predicted RBP	16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	KAT2A	Q92830	837 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	TRIM44	Q96DX7	344 aa	Predicted RBP	16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	SLC35A4	Q96G79	324 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	OSBPL11	Q9BXB4	747 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	LIME1	Q9H400	295 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	PFDN4	Q9NQP4	134 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	OXSM	Q9NWU1	459 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	SLC6A5	Q9Y345	797 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	MPDZ	O75970	2070 aa		16.17	■□□□□ 0.18
MRPL28-203	ENST00000429738	DOCK7	Q96N67	2140 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	MYO1G	B0I1T2	1018 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	KDM4E	B2RXH2	506 aa	Predicted RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	RSL1D1	O76021	490 aa	Known RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	FOSL1	P15407	271 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	CEACAM8	P31997	349 aa	Predicted RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	SLC18A2	Q05940	514 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	FOXD4	Q12950	439 aa	Predicted RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	FAM71E1	Q6IPT2	247 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	ANGPTL8	Q6UXH0	198 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	NPSR1	Q6W5P4	371 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	PM20D2	Q8IYS1	436 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	WDSUB1	Q8N9V3	476 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	NAXE	Q8NCW5	288 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	FAM83F	Q8NEG4	500 aa	Predicted RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	OR7G2	Q8NG99	324 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	FAM76A	Q8TAV0	307 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	EPS8L3	Q8TE67	593 aa	Known RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	TMBIM1	Q969X1	311 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	UGT2B28	Q9BY64	529 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	STMN4	Q9H169	189 aa	Predicted RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	C12orf65	Q9H3J6	166 aa	Known RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	GSX1	Q9H4S2	264 aa	Predicted RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	GALNT9	Q9HCQ5	603 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	GIMAP4	Q9NUV9	329 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	TAS2R7	Q9NYW3	318 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	EDAR	Q9UNE0	448 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	EXO1	Q9UQ84	846 aa	Known RBP	16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	CCL27	Q9Y4X3	112 aa		16.16	■□□□□ 0.18
MRPL28-203	ENST00000429738	PRAMEF25	A6NGN4	478 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	HSPB2	A8KAH6	182 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	NPIPB8	E9PQR5	432 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	TSPAN2	O60636	221 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	ABCB7	O75027	752 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	NME6	O75414	186 aa	Predicted RBP	16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	BMP7	P18075	431 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	DNASE1	P24855	282 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	MPI	P34949	423 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	TIMP3	P35625	211 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	CORO7	P57737	925 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	PSPH	P78330	225 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	HSPB2	Q16082	182 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	ERCC6L	Q2NKX8	1250 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	SPDYA	Q5MJ70	313 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	WIPI1	Q5MNZ9	446 aa	Predicted RBP	16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	DCST1	Q5T197	706 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	POMZP3	Q6PJE2	187 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	LACC1	Q8IV20	430 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	ZZZ3	Q8IYH5	903 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	FAM9C	Q8IZT9	166 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	WDYHV1	Q96HA8	205 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	METTL2A	Q96IZ6	378 aa	Known RBP	16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	COL21A1	Q96P44	957 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	FOLH1B	Q9HBA9	442 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	MYNN	Q9NPC7	610 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	DLL4	Q9NR61	685 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	KLRF1	Q9NZS2	232 aa		16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	RPH3A	Q9Y2J0	694 aa	Predicted RBP	16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738	WBP11	Q9Y2W2	641 aa	Known RBP	16.15	■□□□□ 0.18
MRPL28-203	ENST00000429738		A0A087WV62	115 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	C2orf72	A6NCS6	295 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	ERN1	O75460	977 aa	Known RBP	16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	REM1	O75628	298 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	CBR3	O75828	277 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	SLITRK5	O94991	958 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	UROS	P10746	265 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	CPA3	P15088	417 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	KRT4	P19013	534 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	PRPH2	P23942	346 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	KIR2DL3	P43628	341 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	C2orf80	Q0P641	193 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	KIAA0040	Q15053	153 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	IMPG1	Q17R60	797 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	CFAP157	Q5JU67	520 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	LIPM	Q5VYY2	423 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	NSUN5P2	Q63ZY6	315 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	YRDC	Q86U90	279 aa	Known RBP	16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	RELL2	Q8NC24	303 aa	Predicted RBP	16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	TNIP2	Q8NFZ5	429 aa		16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	ABTB1	Q969K4	478 aa	Predicted RBP	16.14	■□□□□ 0.17
MRPL28-203	ENST00000429738	TMCO6	Q96DC7	493 aa		16.14	■□□□□ 0.17

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms