RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 NUS1Q96E22 293 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 PDXPQ96GD0 296 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 TRMT2BQ96GJ1 504 aaKnown RBP11.75□□□□□ -0.53
CDH3-202ENST00000429102 RNF208Q9H0X6 261 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 C3orf14Q9HBI5 128 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 SLC25A19Q9HC21 320 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 DKK3Q9UBP4 350 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 PAK4O96013 591 aaPredicted RBP11.75□□□□□ -0.53
CDH3-202ENST00000429102 CHRM4P08173 479 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 CD3GP09693 182 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 PPM1FP49593 454 aaPredicted RBP11.75□□□□□ -0.53
CDH3-202ENST00000429102 HCCSP53701 268 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 GNG2P59768 71 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 KCNC3Q14003 757 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 C6orf132Q5T0Z8 1188 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 SLC27A4Q6P1M0 643 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 ZC3H14Q6PJT7 736 aaKnown RBP11.75□□□□□ -0.53
CDH3-202ENST00000429102 C16orf62Q7Z3J2 963 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 SPRED2Q7Z698 418 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 CDH24Q86UP0 819 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 C12orf40Q86WS4 652 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 KIF18BQ86Y91 864 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 TCEAL8Q8IYN2 117 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 SMG7Q92540 1137 aaKnown RBP11.75□□□□□ -0.53
CDH3-202ENST00000429102 TIFAQ96CG3 184 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 SNX18Q96RF0 628 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 AIF1LQ9BQI0 150 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 MYNNQ9NPC7 610 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 NDUFB11Q9NX14 153 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 P2RX2Q9UBL9 471 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 STOML2Q9UJZ1 356 aa11.75□□□□□ -0.53
CDH3-202ENST00000429102 A8MUA0 341 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 SHC1P29353 583 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 KCNJ5P48544 419 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 RGS8P57771 180 aaPredicted RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDH3-202ENST00000429102 MLLT11Q13015 90 aaPredicted RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 PLEKHM3Q6ZWE6 761 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 KCT2Q8NC54 265 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 OR7G1Q8NGA0 311 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 OR13C5Q8NGS8 318 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 ZCCHC10Q8TBK6 192 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 NXPE3Q969Y0 559 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 ZNF689Q96CS4 500 aaPredicted RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 SAMD8Q96LT4 415 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 C12orf66Q96MD2 445 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 QRFPRQ96P65 431 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 PPIL3Q9H2H8 161 aaKnown RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 LSM2Q9Y333 95 aaKnown RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 A0A075B6Q4 140 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 TSPAN4O14817 238 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 ZNF30P17039 623 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 PAICSP22234 425 aaKnown RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 KELP23276 732 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 CST5P28325 142 aaPredicted RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 IRS1P35568 1242 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 MC3RP41968 323 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 FAPQ12884 760 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 ZNF267Q14586 743 aaPredicted RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 XKRXQ6PP77 449 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 AMZ2Q86W34 360 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 TMC8Q8IU68 726 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 SLC39A11Q8N1S5 342 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 OR51A7Q8NH64 312 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 ZDHHC5Q9C0B5 715 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 ABCG5Q9H222 651 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 CCDC86Q9H6F5 360 aaKnown RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 GRIP1Q9Y3R0 1128 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 A3GALT2U3KPV4 340 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 PLXND1Q9Y4D7 1925 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 HNRNPCL2B2RXH8 293 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 I3L521 148 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 NDUFS4O43181 175 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 FGF18O76093 207 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 CSF2RAP15509 400 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 TRIM23P36406 574 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 DDOSTP39656 456 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 DUSP2Q05923 314 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 ZMYND11Q15326 602 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 FAM209AQ5JX71 171 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 MLIPQ5VWP3 458 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 OR9A2Q8NGT5 310 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 FCRL1Q96LA6 429 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 SLC38A2Q96QD8 506 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 CPEB1Q9BZB8 566 aaKnown RBP11.74□□□□□ -0.53
CDH3-202ENST00000429102 ING3Q9NXR8 418 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 MAPRE3Q9UPY8 281 aa11.74□□□□□ -0.53
CDH3-202ENST00000429102 NPIPB8E9PQR5 432 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 ETV6P41212 452 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 HTRA3P83110 453 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 MZT2BQ6NZ67 158 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 TMEM255BQ8WV15 326 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 OR5P2Q8WZ92 322 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 SPATA9Q9BWV2 254 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 SEMA4GQ9NTN9 838 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 A0A1W2PRG6 482 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 TBC1D3BA6NDS4 549 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 J3QLW9 94 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 NUPL2O15504 423 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms