RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 DIO2Q92813 273 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 EFHD2Q96C19 240 aaPredicted RBP13.42□□□□□ -0.26
SGCE-204ENST00000428696 SPACA9Q96E40 222 aaPredicted RBP13.42□□□□□ -0.26
SGCE-204ENST00000428696 ITCHQ96J02 903 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
SGCE-204ENST00000428696 VPS4AQ9UN37 437 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 GXYLT2A0PJZ3 443 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 KLRC4-KLRK1H3BQV0 150 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 SUV39H1O43463 412 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 PEX1O43933 1283 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 FBXO45P0C2W1 286 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 UQCRC2P22695 453 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 PIGAP37287 484 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 CDKN2CP42773 168 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 ATP4BP51164 291 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 RPS26P62854 115 aaKnown RBP13.41□□□□□ -0.26
SGCE-204ENST00000428696 KCNJ2P63252 427 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 UBAP2LQ14157 1087 aaKnown RBP13.41□□□□□ -0.26
SGCE-204ENST00000428696 INPP5JQ15735 1006 aaPredicted RBP13.41□□□□□ -0.26
SGCE-204ENST00000428696 DESI1Q6ICB0 168 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 MFSD12Q6NUT3 480 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 SLC2A7Q6PXP3 512 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 ZNF605Q86T29 641 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 ZNF227Q86WZ6 799 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 SULF2Q8IWU5 870 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 TRIML2Q8N7C3 387 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 CDRT4Q8N9R6 151 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 FAM98AQ8NCA5 519 aaKnown RBP13.41□□□□□ -0.26
SGCE-204ENST00000428696 PSD4Q8NDX1 1056 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 C17orf47Q8NEP4 570 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 ADAMTS15Q8TE58 950 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 SPDL1Q96EA4 605 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 RMND5BQ96G75 393 aaPredicted RBP13.41□□□□□ -0.26
SGCE-204ENST00000428696 SGCZQ96LD1 299 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 COL21A1Q96P44 957 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 BTBD9Q96Q07 612 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 SLC35A5Q9BS91 424 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 TRIM4Q9C037 500 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 SACM1LQ9NTJ5 587 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 BTNL2Q9UIR0 455 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 CBLCQ9ULV8 474 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 KLF13Q9Y2Y9 288 aaPredicted RBP13.41□□□□□ -0.26
SGCE-204ENST00000428696 PCDHGA10Q9Y5H3 936 aa13.41□□□□□ -0.26
SGCE-204ENST00000428696 C2orf72A6NCS6 295 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 HS6ST1O60243 411 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 SCN2BO60939 215 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 PPM1BO75688 479 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 KCNH1O95259 989 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 CCL3P10147 92 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 ACP2P11117 423 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 MATN1P21941 496 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 RPP38P78345 283 aaKnown RBP13.4□□□□□ -0.26
SGCE-204ENST00000428696 PSG6Q00889 435 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 PLGLB1Q02325 96 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 DUSP5Q16690 384 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 DECR1Q16698 335 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 FIGNL1Q6PIW4 674 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 BLOC1S3Q6QNY0 202 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 FAM180AQ6UWF9 173 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 GK5Q6ZS86 529 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 FUNDC1Q8IVP5 155 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 SLC34A3Q8N130 599 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 COX18Q8N8Q8 333 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 SLC16A11Q8NCK7 471 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 CPT1CQ8TCG5 803 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 PNPT1Q8TCS8 783 aaKnown RBP13.4□□□□□ -0.26
SGCE-204ENST00000428696 SFXN5Q8TD22 340 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 GRHL3Q8TE85 626 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 MOAP1Q96BY2 351 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 SNRNP40Q96DI7 357 aaKnown RBP13.4□□□□□ -0.26
SGCE-204ENST00000428696 SLC35G5Q96KT7 338 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 CCDC115Q96NT0 180 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 ACTRT3Q9BYD9 372 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 EPN3Q9H201 632 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 METTL7AQ9H8H3 244 aa13.4□□□□□ -0.26
SGCE-204ENST00000428696 TRIM45Q9H8W5 580 aaPredicted RBP13.4□□□□□ -0.26
SGCE-204ENST00000428696 MRTO4Q9UKD2 239 aaKnown RBP13.4□□□□□ -0.26
SGCE-204ENST00000428696 CDK2AP1O14519 115 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 NME2P1O60361 137 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 CD1EP15812 388 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 CNR1P21554 472 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 DRD4P21917 467 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 NME2P22392 152 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 DNASE1L1P49184 302 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 MEOX1P50221 254 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 LRRC74AQ0VAA2 488 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 CYP27C1Q4G0S4 372 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 BICRALQ6AI39 1079 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 LYPD8Q6UX82 237 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 NUP54Q7Z3B4 507 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 DND1Q8IYX4 353 aaKnown RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 CPSF7Q8N684 471 aaKnown RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 BCORP1Q8N888 145 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 GOLM1Q8NBJ4 401 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 OR5D16Q8NGK9 328 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 PSMA8Q8TAA3 256 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 CDS1Q92903 461 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 SCMH1Q96GD3 660 aa13.39□□□□□ -0.27
SGCE-204ENST00000428696 LMF2Q9BU23 707 aaKnown RBP13.39□□□□□ -0.27
SGCE-204ENST00000428696 TSPAN10Q9H1Z9 355 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms