RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 HIST2H2AA3Q6FI13 130 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 PAQR6Q6TCH4 344 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 GPR65Q8IYL9 337 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 DBF4BQ8NFT6 615 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NELL1Q92832 810 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 RIT1Q92963 219 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 HIST1H2AHQ96KK5 128 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ZFP42Q96MM3 310 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 HIST1H2AJQ99878 128 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NLNQ9BYT8 704 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 CWH43Q9H720 699 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 CPNE7Q9UBL6 633 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 IL20RAQ9UHF4 553 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SONP18583 2426 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 H0YC42 278 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 H7C2Y5 167 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 HLA-GP17693 338 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 IDSP22304 550 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 RBMS1P29558 406 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 MXD1Q05195 221 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 METTL11BQ5VVY1 283 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ZNF660Q6AZW8 331 aaPredicted RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 REEP3Q6NUK4 255 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 COMMD7Q86VX2 200 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 OR1S1Q8NH92 325 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 WDR20Q8TBZ3 569 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NEURL3Q96EH8 262 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 POLR2J3Q9H1A7 115 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 ESRP2Q9H6T0 727 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 COMMD3Q9UBI1 195 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 PRKAG2Q9UGJ0 569 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 DUSP12Q9UNI6 340 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 LOC105369274A0A096LPK9 316 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 GABRR3A8MPY1 467 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 SULT1C2O00338 296 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 GAPDHSO14556 408 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 EIF1BO60739 113 aaKnown RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 S100A6P06703 90 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 RPS12P25398 132 aaKnown RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 EIF1P41567 113 aaKnown RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 ZNF630Q2M218 657 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 OR4N4Q8N0Y3 316 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 MORN4Q8NDC4 146 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 GPR32P1Q8NGA4 272 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 PHYHIPLQ96FC7 376 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 IL26Q9NPH9 171 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 COQ3Q9NZJ6 369 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 FZD4Q9ULV1 537 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 CHST2Q9Y4C5 530 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 SPG11Q96JI7 2443 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 H3BNC9 293 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 M0QZQ0 153 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 FFAR3O14843 346 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 GPR42O15529 346 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 AP2A2O94973 939 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 PCDH8O95206 1070 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ECDO95905 644 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 SMPD1P17405 629 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ELK1P19419 428 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 TYMPP19971 482 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 CD22P20273 847 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 PMELP40967 661 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 SLC1A3P43003 542 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 AFF1P51825 1210 aaKnown RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 GPR17Q13304 367 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 MPPED2Q15777 294 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ELFN2Q5R3F8 820 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 RAB11FIP2Q7L804 512 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 LRRC70Q7Z2Q7 622 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 CLDN19Q8N6F1 224 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 TFGQ92734 400 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 UROC1Q96N76 676 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 KLHL5Q96PQ7 755 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 FAM83CQ9BQN1 747 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 SLC12A9Q9BXP2 914 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ADGRE3Q9BY15 652 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 CDCP1Q9H5V8 836 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 DNAJC27Q9NZQ0 273 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 MKL2Q9ULH7 1088 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ZNF593O00488 134 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 GADD45GO95257 159 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ELAVL4P26378 380 aaKnown RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 MST1P26927 711 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 LCN1P31025 176 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 PITPNBP48739 271 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 GPR143P51810 404 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 CDK6Q00534 326 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 EXOC3L2Q2M3D2 409 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 CRTC2Q53ET0 693 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 TCTE1Q5JU00 501 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ACSM5Q6NUN0 579 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 PGBD2Q6P3X8 592 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 TBC1D19Q8N5T2 526 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 C8orf37Q96NL8 207 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 WBP1LQ9NX94 342 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 ZNF624Q9P2J8 865 aaPredicted RBP4.84□□□□□ -1.63
RIF1-203ENST00000428287 GULP1Q9UBP9 304 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 BAIAP2Q9UQB8 552 aa4.84□□□□□ -1.63
RIF1-203ENST00000428287 A0A1W2PRB8 838 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms