RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 IFI44LQ53G44 452 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 OGFRL1Q5TC84 451 aaPredicted RBP14.06□□□□□ -0.16
GINS3-203ENST00000426538 TMEM164Q5U3C3 297 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 OR14A16Q8NHC5 309 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 PIK3R3Q92569 461 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 PMEPA1Q969W9 287 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 FBXL20Q96IG2 436 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 VPS50Q96JG6 964 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 OR8D2Q9GZM6 311 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 VCXQ9H320 206 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 TRIM45Q9H8W5 580 aaPredicted RBP14.06□□□□□ -0.16
GINS3-203ENST00000426538 MTHFD2LQ9H903 347 aaPredicted RBP14.06□□□□□ -0.16
GINS3-203ENST00000426538 DNAJB9Q9UBS3 223 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 NXT1Q9UKK6 140 aaKnown RBP14.06□□□□□ -0.16
GINS3-203ENST00000426538 SATB2Q9UPW6 733 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 NUP210LQ5VU65 1888 aa14.06□□□□□ -0.16
GINS3-203ENST00000426538 PCNX2A6NKB5 2137 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 EP300Q09472 2414 aaPredicted RBP14.05□□□□□ -0.16
GINS3-203ENST00000426538 TTC36A6NLP5 189 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 PLD2O14939 933 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 ALOX12BO75342 701 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 NKX2-2O95096 273 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 ETV5P41161 510 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 MAP3K8P41279 467 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 EFNA3P52797 238 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 POU6F2P78424 691 aaPredicted RBP14.05□□□□□ -0.16
GINS3-203ENST00000426538 CHRNEQ04844 493 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 DUSP8Q13202 625 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 DCST2Q5T1A1 773 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 LCN10Q6JVE6 187 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 MRPL14Q6P1L8 145 aaKnown RBP14.05□□□□□ -0.16
GINS3-203ENST00000426538 FAM199XQ6PEV8 388 aaPredicted RBP14.05□□□□□ -0.16
GINS3-203ENST00000426538 SLCO6A1Q86UG4 719 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 ZNF615Q8N8J6 731 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 CHDHQ8NE62 594 aaPredicted RBP14.05□□□□□ -0.16
GINS3-203ENST00000426538 C16orf52Q8NHV5 167 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 SLC2A12Q8TD20 617 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 PROX1Q92786 737 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 SDF2Q99470 211 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 LMF2Q9BU23 707 aaKnown RBP14.05□□□□□ -0.16
GINS3-203ENST00000426538 CRB3Q9BUF7 120 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 DDA1Q9BW61 102 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 SLC38A1Q9H2H9 487 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 WDR54Q9H977 334 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 AKIRIN1Q9H9L7 192 aaPredicted RBP14.05□□□□□ -0.16
GINS3-203ENST00000426538 COPS7AQ9UBW8 275 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 C3orf18Q9UK00 162 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 SH3GLB1Q9Y371 365 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 WDR45Q9Y484 360 aa14.05□□□□□ -0.16
GINS3-203ENST00000426538 COL27A1Q8IZC6 1860 aaPredicted RBP14.05□□□□□ -0.16
GINS3-203ENST00000426538 hCG_2039718K7EN88 272 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 PEX1O43933 1283 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 STX11O75558 287 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 STK17BO94768 372 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 SEMG1P04279 462 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 ALPPP05187 535 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 FESP07332 822 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 CCNYL3P0C7X3 344 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 ITGA2P17301 1181 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 SLC5A2P31639 672 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 MAGEA2P43356 314 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 PSG6Q00889 435 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 EXOSC6Q5RKV6 272 aaKnown RBP14.04□□□□□ -0.16
GINS3-203ENST00000426538 ZBTB49Q6ZSB9 765 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 LANCL3Q6ZV70 420 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 OLIG3Q7RTU3 272 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 GALNT6Q8NCL4 622 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 GEMIN6Q8WXD5 167 aaKnown RBP14.04□□□□□ -0.16
GINS3-203ENST00000426538 HOXB13Q92826 284 aaPredicted RBP14.04□□□□□ -0.16
GINS3-203ENST00000426538 VSTM2LQ96N03 204 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 SLC46A1Q96NT5 459 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 CIB1Q99828 191 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 Q9N2J8 555 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 MKLN1Q9UL63 735 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 PADI2Q9Y2J8 665 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 DTNAQ9Y4J8 743 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 KIF26BQ2KJY2 2108 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 TMEM229AB2RXF0 380 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 PROB1E7EW31 1015 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 FCMRO60667 390 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 CD63P08962 238 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 ZNF23P17027 643 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 OR1E2P47887 323 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 KCNJ5P48544 419 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 LIMK1P53667 647 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 SLC37A1P57057 533 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 FOXL2P58012 376 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 VLDLRP98155 873 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 CYP27C1Q4G0S4 372 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 ZNF311Q5JNZ3 666 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 PIWIL3Q7Z3Z3 882 aaKnown RBP14.04□□□□□ -0.16
GINS3-203ENST00000426538 PEX5LQ8IYB4 626 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 MORN4Q8NDC4 146 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 WDR36Q8NI36 951 aaKnown RBP14.04□□□□□ -0.16
GINS3-203ENST00000426538 ZNF354BQ96LW1 612 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 SPSB2Q99619 263 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 C9orf16Q9BUW7 83 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 C19orf25Q9UFG5 118 aaPredicted RBP14.04□□□□□ -0.16
GINS3-203ENST00000426538 PADI1Q9ULC6 663 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 ZNF232Q9UNY5 417 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms